Detailed information of Ahemp_014405-T1 in Acropora hemprichii

Genomic Location: scaffold_65:386867...399202
NR annotation: XP_044179337.1, rab5 GDP/GTP exchange factor-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9JM13Rab5 GDP/GTP exchange factor OS=Mus musculus OX=10090 GN=Rabgef1 PE=1 SV=1
Q9UJ41Rab5 GDP/GTP exchange factor OS=Homo sapiens OX=9606 GN=RABGEF1 PE=1 SV=3
O18973Rab5 GDP/GTP exchange factor OS=Bos taurus OX=9913 GN=RABGEF1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|ZnF_A20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18151DUF5601Domain of unknown function (DUF5601)DomainInterproscan
PF01754zf-A20A20-like zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037191Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR041545DomainRABX5, catalytic core helical domainInterproscan
IPR002653DomainZinc finger, A20-typeInterproscan
IPR045046FamilyVacuolar protein sorting-associated protein 9-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23101RAB GDP/GTP EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan

TOP