Detailed information of Ahemp_015386-T1 in Acropora hemprichii

Genomic Location: scaffold_76:1009715...1015941
NR annotation: XP_029180819.2, tripartite motif-containing protein 26-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q865W2E3 ubiquitin-protein ligase TRIM50 OS=Sus scrofa OX=9823 GN=TRIM50 PE=2 SV=1
Q9HCM9E3 ubiquitin-protein ligase TRIM39 OS=Homo sapiens OX=9606 GN=TRIM39 PE=1 SV=2
Q1XHU0E3 ubiquitin-protein ligase TRIM39 OS=Pan troglodytes OX=9598 GN=TRIM39 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR052667FamilyE3 ubiquitin-protein ligase RING-typeInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47156PROTEIN CBG20824Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan

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