Gene detail

Detailed information of Ahemp_015740-T1 in Acropora hemprichii

Genomic Location: scaffold_81:286922...287687
NR annotation: XP_015768969.1, PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q14565	Meiotic recombination protein DMC1/LIM15 homolog OS=Homo sapiens OX=9606 GN=DMC1 PE=1 SV=2
Q61880	Meiotic recombination protein DMC1/LIM15 homolog OS=Mus musculus OX=10090 GN=Dmc1 PE=1 SV=1
B8BM09	Meiotic recombination protein DMC1 homolog A OS=Oryza sativa subsp. indica OX=39946 GN=DMC1A PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08423	Rad51	Rad51	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013632	Domain	DNA recombination and repair protein Rad51-like, C-terminal	Interproscan
IPR020588	Domain	DNA recombination and repair protein RecA-like, ATP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000150	Molecular Function	DNA strand exchange activity	Interproscan
GO:0000730	Biological Process	DNA recombinase assembly	Interproscan
GO:0000794	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0006312	Biological Process	mitotic recombination	Interproscan
GO:0007131	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0008094	Molecular Function	ATP-dependent activity, acting on DNA	Interproscan
GO:0042148	Biological Process	DNA strand invasion	Interproscan
GO:0070192	Biological Process	chromosome organization involved in meiotic cell cycle	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0140664	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10870	RAD51L2, RAD51C; RAD51-like protein 2	-	DNA repair and recombination proteins	ko03400	deepkoala