Detailed information of Ahemp_016908-T1 in Acropora hemprichii

Genomic Location: scaffold_101:352218...354157
NR annotation: XP_015761579.1, PREDICTED: nuclear factor 1-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q90932Nuclear factor 1 X-type OS=Gallus gallus OX=9031 GN=NFIX PE=2 SV=1
P14057Nuclear factor 1 (Fragment) OS=Sus scrofa OX=9823 GN=NFI PE=1 SV=1
P70255Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyMH1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10524NfI_DNAbd_pre-NNuclear factor I protein pre-N-terminusFamilyInterproscan
PF03165MH1MH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020604DomainCTF transcription factor/nuclear factor 1, DNA-binding domainInterproscan
IPR000647FamilyCTF transcription factor/nuclear factor 1Interproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR019548DomainCTF transcription factor/nuclear factor 1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11492NUCLEAR FACTOR IInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09171NFIX; nuclear factor I/X-Transcription factorsko03000deepkoala

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