Gene detail

Detailed information of Ahemp_017761-T1 in Acropora hemprichii

Genomic Location: scaffold_118:741910...749155
NR annotation: XP_029188020.2, nuclear pore complex protein Nup98-Nup96-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P49793	Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2
P52948	Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens OX=9606 GN=NUP98 PE=1 SV=4
G5EEH9	Nuclear pore complex protein Nup98-Nup96 OS=Caenorhabditis elegans OX=6239 GN=npp-10 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21240	Nup98_GLEBS	Nup98, Gle2-binding sequence	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037665	Family	Nucleoporin peptidase S59-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23198	NUCLEOPORIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000973	Biological Process	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006405	Biological Process	RNA export from nucleus	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0008139	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0034398	Biological Process	telomere tethering at nuclear periphery	Interproscan
GO:0044614	Cellular Component	nuclear pore cytoplasmic filaments	Interproscan