Gene detail

Detailed information of Ahemp_017788-T1 in Acropora hemprichii

Genomic Location: scaffold_119:414083...417036
NR annotation: XP_020613022.1, AP-2 complex subunit sigma isoform X1 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q17QC5	AP-2 complex subunit sigma OS=Bos taurus OX=9913 GN=AP2S1 PE=2 SV=1
P53680	AP-2 complex subunit sigma OS=Homo sapiens OX=9606 GN=AP2S1 PE=1 SV=2
P62743	AP-2 complex subunit sigma OS=Mus musculus OX=10090 GN=Ap2s1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01217	Clat_adaptor_s	Clathrin adaptor complex small chain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016635	Family	Adaptor protein complex, sigma subunit	Interproscan
IPR027156	Family	AP-2 complex subunit sigma	Interproscan
IPR000804	Conserved_site	Clathrin adaptor complex, small chain	Interproscan
IPR022775	Domain	AP complex, mu/sigma subunit	Interproscan
IPR011012	Homologous_superfamily	Longin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015031	Biological Process	protein transport	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0030122	Cellular Component	AP-2 adaptor complex	Interproscan
GO:0035615	Molecular Function	clathrin adaptor activity	Interproscan
GO:0072583	Biological Process	clathrin-dependent endocytosis	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0030117	Cellular Component	membrane coat	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11827	AP2S1; AP-2 complex subunit sigma-1	-	Membrane trafficking	ko04131	deepkoala