Detailed information of Ahemp_017992-T1 in Acropora hemprichii

Genomic Location: scaffold_124:212532...215322
NR annotation: XP_015762177.1, PREDICTED: basement membrane-specific heparan sulfate proteoglycan core protein-like isoform X6 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q05793Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1
P24043Laminin subunit alpha-2 OS=Homo sapiens OX=9606 GN=LAMA2 PE=1 SV=4
P19137Laminin subunit alpha-1 OS=Mus musculus OX=10090 GN=Lama1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000034DomainLaminin IVInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001738Biological Processmorphogenesis of a polarized epitheliumInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0005610Cellular Componentlaminin-5 complexInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

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