Gene detail

Detailed information of Ahemp_018193-T1 in Acropora hemprichii

Genomic Location: scaffold_131:10817...15060
NR annotation: XP_015769219.1, PREDICTED: ubiquitin carboxyl-terminal hydrolase 30-like isoform X3 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
A4QNN3	Ubiquitin carboxyl-terminal hydrolase 30 OS=Xenopus tropicalis OX=8364 GN=usp30 PE=2 SV=1
Q70CQ3	Ubiquitin carboxyl-terminal hydrolase 30 OS=Homo sapiens OX=9606 GN=USP30 PE=1 SV=1
D3ZPG5	Ubiquitin carboxyl-terminal hydrolase 30 OS=Rattus norvegicus OX=10116 GN=Usp30 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR050185	Family	Ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan