Gene detail

Detailed information of Ahemp_018300-T1 in Acropora hemprichii

Genomic Location: scaffold_132:390150...394282
NR annotation: XP_029205730.2, DNA excision repair protein ERCC-1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P07992	DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1
Q1LZ75	DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1
P07903	DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03834	Rad10	Binding domain of DNA repair protein Ercc1 (rad10/Swi10)	Family	Interproscan
PF14520	HHH_5	Helix-hairpin-helix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010994	Homologous_superfamily	RuvA domain 2-like	Interproscan
IPR047260	Domain	ERCC1-like, central domain	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR004579	Family	ERCC1/RAD10/SWI10 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12749	EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000110	Cellular Component	nucleotide-excision repair factor 1 complex	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0006312	Biological Process	mitotic recombination	Interproscan
GO:0070522	Cellular Component	ERCC4-ERCC1 complex	Interproscan
GO:0070914	Biological Process	UV-damage excision repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10849	ERCC1; DNA excision repair protein ERCC-1	-	DNA repair and recombination proteins	ko03400	deepkoala