Gene detail

Detailed information of Ahemp_018378-T1 in Acropora hemprichii

Genomic Location: scaffold_134:24443...27990
NR annotation: XP_015772428.1, PREDICTED: protein NLRC3-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_018378-T1

ATGAAATTACCAGAAACAGACCAAGACCTTGTAGCATTATACCAAGTTGAACTGAAGCAACTTGGCTGTATCGCCGTAGAGGGTTTGAAGAACGATAGCATGTATTTTGACCAGAGCGCATTTCAGGGTTTCTCAAGCGATTTAAAATCTGGCTTCGGATTTTTGTCAGTGGAGGCTGGACGAAGCAAACGAAGACCAGGTCGAAGCTATGGATTCCTGCATAAGAGCTTTCAAGAATTCTTTGCAGCGTTTTATCACTGTCATCAGCTTCTTGATGGGGAAATCTCTGTTGATAGCTTAATTGCAGACCATTTTAATGAGTTCCGGCAGGTGCTGATATTTACGACTGGTTTGTTAGTTCAAAAGTGCGAAACAGTAGTCAAGGCAGTTATCGCTGGTGTAGCTACTCAATTCAACCAAGAGGGTGTACGTCTAGACGTTGCATTGGCTTGTATCAATGAATGCAAAAGAGAGGAGAATACTTTTCACAAAGAAATGGCACAGTTTTTTGGTTCACATTTTCAACTTCAGACGGCTCATTGCGACAGATTGAACAAGGAACTTGCTGCTGTGTATATCGAAACCATGAAAACGAATTCCACGGTTACAAAACTGCTTCTCCCTAATTGTGACATTGATGATGCAAGTGTTGCTGCACTGGCGAAAGGGCTGAAAGAAGATTCAACTCTGACAGAGCTAGACTTGTCATATAATGCAATTGGCGAAATCGGTGCTGATGCTCTGGCTAATGGATTGAAAGAAAATTCAACGCTGACAGGGCTAGACTTATCTTACAATGCAATTGGCGAAGACGGTGCTGATGCTCTGGCTAAAGGACTGAAAGAAAATTCAACGCTAACATCGCTGAACTTGTCTAATAATGCGATTAGAAATGTTGGTGCTGATGCACTGGCTAAAGGACTAAAAGAAAATTCAACGCTGAAATCGCTGGACTTGTCTTATAATGAAATTGGAAATGTTGGTGCTGATGCAATGGCTAAAGTATTGAAGGAAAATTCAACGCTGACATCGCTGAACTTGTCTCATAATGACATTGGAAATGTTGGTGCTGATGCACTGGCTAAAGGATTGAAAGAAAATTCAATGCTGACATTGCTGGAGTTGTCTAAGAATGTAATTGGAAATGTTGGTGCTGATGCACTGGCGAAAGGATTGAAAGACAAATCAACGCTGACAAAAGTGCGTTTATATGGTAATTTAATTGACGAGGTTATTGCCGCTGCAATAGAAGACGCTTTGAAATAGAATCAATGGTGAAGACTCATGGATTATGGTTGTCCAGAGTGACAGGTTGGCGCTCCATGATGTTCGATATATCATTCATTAAATGGAGTTGAAAATTGTGCCATACTTTAATATTTACTATTATAACGTTTTGAGCAGTGACTTTTCGCTGAGCATCAAACCCTGTCCACCAAGACTTATATGAAGGAGCAAGCTGGTAGTTTATTTCCGCGGAAGAAGTTGTGGCAATTTTCTTTGTTTTGTTAGATCGTAGTAGAGTTTCGTCGTTGTAAAATGATTTTTTTGTTTGTTTGTTTTCTTTGTTACATATGATCCGTCAGTTTGACAGGTTCTTGCACCAATAATTGCTCCATTGTCGTGATGTTTAGTTTACGTCATTTATTACTTTTAATCCATTCTTAGTTTTCGCTGTAGTTGTACACCTCGAATGCGTACCGTTGAAGGACGTTGCGTGCTCAATATTGAGCCGTTTTGGTTCATCAAGTGAAAAGCAGAAGAAGTGTCTAGTACGCATAATTTATTAGTCCATTTCCCTGATGTCCTCTGAAAAAATACAACATGAAATTACCACATTTGTGGTTTGACGACGGCGTGCACTTCATCGGTGAATAATATTTCCTATGTATTTACCTTAGCGATGAACTTGTCAGTCTACTTGGTTTTTCTCATTAAAGATGCAAATGTCTGACGTCCTCGTTGCCGTCGTCAATGCGCAAGCTCCCTGTTTTACAACGCAAACCGAATGGAATCGCGAAGTAATCTCTATTTCTGAGAAGTGATTTTTGCGTTCGGAATATCTTTGCATGGAGCTAAGACTATGACGGCACCGAAAACGCCTTCCAAATATTGAACTTAATGCAGAGGCAACCATTTTGCTTATATTACAAGATGCTTATTGGTTAGGTGCTCTTCCTGGTCAAATCTTTCCCGCAATACAGGAAAAGAAAAAAAAACTAAGACAATGCTGTGTTCAACCAGTGAAATGGCTCGAGGACATTAGAACCTTAGCGAGACCGGCTTAAAATTTTCCGACCGTGACCTTGAAAGAATCATACAAAGTTTCTTGGTCTGAATATACGGATATGTATTGAATATAAATGCTGTGTATACGACTGTTCAAAATGTGAGGTTTCAAAAAATTTTAACTTAACATCCAAGTAAGTAGTCAATACATTTGTCTCTAAATCGGAAAATGAAATATGTTACAATCATGCATTTTATACTCTGCGTAACAGCAACAATTTACGTGTTAGTGAATTTGCGTAATTCCTGGAAAAAAACATCGCCAATAACCATTTACAGCAACAGTAACCAAACTTGCAACAATGTATTGCTAGAAAATACAATGAGctacaatctatttatccataaactagac

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR052410	Family	Dynein regulatory complex subunit 5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24107	YNEIN REGULATORY COMPLEX SUBUNIT 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan