Gene detail

Detailed information of Ahemp_020463-T1 in Acropora hemprichii

Genomic Location: scaffold_528:7302...17483
NR annotation: XP_029214051.2, tripartite motif-containing protein 67-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O60260	E3 ubiquitin-protein ligase parkin OS=Homo sapiens OX=9606 GN=PRKN PE=1 SV=2
Q9JK66	E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus OX=10116 GN=Prkn PE=1 SV=1
Q9WVS6	E3 ubiquitin-protein ligase parkin OS=Mus musculus OX=10090 GN=Prkn PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|RBR

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17978	zf-RING_14	RING/Ubox like zinc-binding domain	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR002867	Domain	IBR domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan
IPR044066	Domain	TRIAD supradomain	Interproscan
IPR041170	Domain	RING/Ubox-like zinc-binding domain	Interproscan
IPR003977	Family	E3 ubiquitin-protein ligase parkin	Interproscan
IPR047534	Domain	E3 ubiquitin-protein ligase parkin, BRcat domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan