Gene detail

Detailed information of Ahemp_020791-T2 in Acropora hemprichii

Genomic Location: scaffold_711:18946...33886
NR annotation: XP_044176275.1, LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex subunit pan3-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A1L1C7	PAN2-PAN3 deadenylation complex subunit pan3 OS=Xenopus tropicalis OX=8364 GN=pan3 PE=2 SV=1
Q58A45	PAN2-PAN3 deadenylation complex subunit PAN3 OS=Homo sapiens OX=9606 GN=PAN3 PE=1 SV=3
Q640Q5	PAN2-PAN3 deadenylation complex subunit Pan3 OS=Mus musculus OX=10090 GN=Pan3 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18101	Pan3_PK	Pan3 Pseudokinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030844	Family	PAN2-PAN3 deadenylation complex subunit PAN3	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR041332	Domain	Pan3 pseudokinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12272	DEADENYLATION COMPLEX SUBUNIT PAN3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0031251	Cellular Component	PAN complex	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0008143	Molecular Function	poly(A) binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12572	PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3	-	Messenger RNA biogenesis	ko03019	deepkoala