Gene detail

Detailed information of Ahemp_021398-T1 in Acropora hemprichii

Genomic Location: scaffold_1176:17036...19395
NR annotation: XP_029185525.1, fez family zinc finger protein 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_021398-T1

GCAAAAAGGAAAATCTTTTTTCTTCCAGTTTAATGTAAAACAATACACTTTCACGCGACAGAAGGCCGACCATTTTGCGAAAGTCGCGAATTGCGAGGGAACTATGGCCGACTGTTAAGTTAGAATAAAACATTGCAGTGTTTTAGCAGCGAAGTAATTCCGCACTTTAGAAAGTACAACTACAGAACACGAAAATTAGAGTCAGCAATTAAGTGCTAATGAGCTACCAGGGCGGGAACTTTTTACTTCAATTGTTCATACGTGTTATTAAGGGTGCCTTTATACCGAGTTCTGATTGGTCCCTTCGCGACCTCCCTCGAGAGAACAGCTCTTGTCTGTCCAATGAAATCAGCCGTGCATGTCCGCGGTTGGACAGCTTACCTTGTGTTTTTGTTTGTATTGCCCTCTTTTCAGCTGACATAATTCGTACAAAGGTAAAAAGAGCACACGAACGCTTTAAATGCGGCACGCGCCAGCAAATTAGCCAGTTGATTCAGTGACACGCTTGTCAGCCTCGTGCCAGCTTTAGATTCGCGTGTGATTTGTACACAAACTCTTCGAAAACTAGCTGTCGAACGTTTGATCGTGAAAGTTGCCCAAAATCGTGGTTGCAGCCGATTTGAAATCGTCTGCACTTCTGACAGCGAGATTAACTGAAGCTAATATAACTGTATTGAAGGTCATATCAGAGTATGCCTCGATCATTTCTTGTCAAGCTGAAAAAGAGTAGTCCAGCCTCTCTCTTTTGGGACCAAGATTGTGATGTGCCAGCTACTCCGCCTAACTTATGGGAACCTATCAGAGTGCAGATCGAACCGGCGCAGATTTTTCAACCCATCCAATTGGATCTCACATCTCTTGAGCCAGAGGTTTTAACTGGAAAAGCACAGCTGAAACCGAACGCACGGTTTTTTGACCCATTTACTTTCAATTCTCTTCAGTTAAATTCTGACCGCGATATAAGCGTTGGGAAGCCATTGTTTGAAGAACGACCATGTTCTTGTGCGCACTCTAGAAATCCAAGCCCTGCTAGCTTAGACGGCGCGCTGGTCCCTTCGCCGACTCGAAGCGATGACGGATATCCGAGCGCCGGTATTTTTATCCCCGGAAGTGGCTTCCAACACTTGGAAAACACAAAGTCTTCCCCGCTTCCGGTAGCAAGCCTCGGTGCTTCTACAGTTGGCCGCAAAAGACGTAACGGTACTCCGAAGACATTCACCTGCGAAGTTTGTGGTAAAGTTTTCAATGCGCATTACAATCTTACTCGCCACATGCCCGTACATACGGGAGCTCGGCCTTTCAAGTGCAAAATATGCGGAAAAGGTTTTCGGCAAGCCAGTACTCTCTGCAGGCACAAGATCATTCACACAAAGGAAAAGCCCCACAAGTGTAACATTTGTGGAAAAGCTTTCAACAGATCATCTACGTTGAACACTCATATTCGCATACACGCCGGCTACAAGCCATTTGTCTGCGACATTTGTGGAAAAGGATTTCACCAAAAAGGGAACTATAAAAATCATCGCCTTACGCACACCGGCGAGAAGCCGTTTAAATGCCACATTTGCGGCAAAGCGTTTCATCAAGTGTACAATTTGACATTTCATATGCACACGCACAACGACAAAAAACCATTCACATGTAAAGAATGTGGCAAAGGATTCTGTCGGAATTTTGACCTTAAAAAGCATATCCGGAAATTACACGAGAACAAAGAGAAACGTGACAGAATTGAACAATAAAGCTCGCCTCGTGGACTGTCTGTTACCTAATGACAAGTTAAAAAGACAAGCACACTTGTGATTTATGTCGTAAAATATTGATCGACATCGTAGCAAAAGTTGAAAAGAGGATCTCGCCATTAAGAGAGACCATTCTTGGAGCTATTGTAGAAAAATGTGTTATGAAGACGTTTTAAGAATATATGAATCAAAATTAATTGTTCTCGACATAACGGATAAACATGCACGTGGTAAAACATAAATACGGTCACAGAGAAGTTGATAAGGAACAATATCTGCGGACATCGGAGACAAAAGACAGTAAGCTAAATGTGAATATATAAATAAAAGTTTGTAACATGCAGATTCCACATTTCACTTGACATAGCAATTCTATTATTATCTGTAAATACAAAATAAGGC

Protein

Uniprot

Gene family

Uniprot term	Description
Q9IAJ2	Fez family zinc finger protein 1 OS=Xenopus laevis OX=8355 GN=fezf1 PE=2 SV=1
Q28G88	Fez family zinc finger protein 2 OS=Xenopus tropicalis OX=8364 GN=fezf2 PE=2 SV=1
A0PJY2	Fez family zinc finger protein 1 OS=Homo sapiens OX=9606 GN=FEZF1 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23235	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24502	FEZF; Fez family zinc finger protein	-	Transcription factors	ko03000	deepkoala