Gene detail

Detailed information of Ahemp_021508-T1 in Acropora hemprichii

Genomic Location: scaffold_1294:7880...18206
NR annotation: XP_029209968.1, transitional endoplasmic reticulum ATPase [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P55072	Transitional endoplasmic reticulum ATPase OS=Homo sapiens OX=9606 GN=VCP PE=1 SV=4
Q01853	Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4
P46462	Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02933	CDC48_2	Cell division protein 48 (CDC48), domain 2	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050168	Family	AAA ATPase domain-containing protein	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR004201	Domain	CDC48, domain 2	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029067	Homologous_superfamily	CDC48 domain 2-like superfamily	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23077	AAA-FAMILY ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13525	VCP, CDC48; transitional endoplasmic reticulum ATPase	-	Exosome	ko04147	deepkoala