Detailed information of Ahemp_022036-T1 in Acropora hemprichii

Genomic Location: scaffold_1918:7644...12101
NR annotation: XP_015777051.1, PREDICTED: fibrinogen-like protein A [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70165Ficolin-1 OS=Mus musculus OX=10090 GN=Fcn1 PE=1 SV=1
Q9WTS8Ficolin-1 OS=Rattus norvegicus OX=10116 GN=Fcn1 PE=2 SV=2
D8VNS8Ryncolin-2 OS=Cerberus rynchops OX=46267 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001759FamilyPentraxin-relatedInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

TOP