Gene detail

Detailed information of Ahemp_022369-T1 in Acropora hemprichii

Genomic Location: scaffold_2407:421...8547
NR annotation: XP_029179297.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114946819 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ahemp_022369-T1

ATGCCAGCTAACCTTGGCTACATATCTGCAATGCTTTTCAATCAAAACAACTGCTGCGCCGAATCCTCCACCGTTACGACCAAATTCGAAGTAGAAGTAGGAAACGATTTGTGTGTTATGATGGGATACGAAAAGGACAGATGCATGGGACATTTGACAAGTGGAGGGACTACAGCAAACATTGAGGCAATTTGGGCAGCAAGAAATGTCAAGTATTTTCCATTAGGATTACAAGAAGCATTGTTAAAGGAGGACAGACTATCTAAGGCCAGAGGATACAAGGTCCCCATCCCACAAAGAGGAAGCAAAAAGGAAGTAGTGAGCGCTTCTCAGTGGGAACTTCTCAATCTTGATGTGGAAAGTATTTTAAAGATGCCACTTGAAGTAGAGGCGATGGCTAAACTTCAGCACGAGGAATTTATGGAGATCATGGAGAATTATCTTTATGAGTCTATAGGTGCACTGGAATTCACCCGACGACATAAACTGACAAAGACTCCCTGTGTCATGGTTCCAAGAACCTCACACGTTTCTTTTTCCAAGGCAGTAACAATGCTAGGACTGGGGCGAGATAGCCTCGTCACAGTGAAAATGGATGAAGATGCCCGAATGGACATCAATGATTTGAAGACTATCCTCACGGAGAAAATGCAGCAGGAGATTCCCGTCATTACTGTGATTCCTGTCATGGGAACAACCGAAGAAGGTGCCGTGGATCCCCTAACTGAAATTCTGGCCTTGAAAGATGAATTTAAAAAGCAAGGCCTTAATTTTGGTGTACATGCGGATGGAGCCTGGGGAGGATATTTTTGCAGCATGATGCGTGACCCACCGCACAGCTCTGATTCACCAGACACAGAACAGGAAGGTTTCGTACCCGAGATGTACTTGAGCACCTACGTCCAAAAACAGTTATCCGCGCTCCAGTACTGCGATACCGTTGCTATCGATCCCCACAAGTCGGGCTTTTGTCCCTACCCAGCTGGAGCGATTTGCTACCGAGATAAAGTCATGAACAGTTTCCTACAAGCTGGGGCGGGGGTCGCATATCTTCATGGCAAAAGGACTCTTGGAGACGTTGGTATAGAGGGATCCAAACCCGGACGGGCAGCTGCTGGAGTTATGCTTGCCAACAGGGTCATTGGCCTTCATAAGAATGGATATGGCCGTATTCTAGCTGAATGCATGTTTACATCCAAGATTGTGTACTGCCTATGGGTTACGCTCGCTAAAGAAGACGATAACTTTGTCATCCAAACAACTAAACCTCTTCCTAAATTCAAAAACTGGTCAGAACAAGAACAGCTCAGATTTATAAGGGAACGGATCCTGGGAAAATCCAACGAACGACTTGTTCAGGATGAAGAGGTTATGGAGTACCTCAAAGAGGTTGGACCAGACACATTGATGCCTTGTTTCTCTGTAAACATCAAAGGAAACAAGAGTGTTGACTTATGCAATGCAGTAAACACGGCGCTCTTCCAAAGCCTTCGCCACACATCAGATGAGCATACAGCTCATCGCATTCCGTTGATCGTTACAGCATCATGTAAGATTCCATACAAACAAAGTGTTGCCGTGAGTGACTTCAAGAAAAGACTTGGGTTGGAATCCAATAATGACACGCCTGTTAAATTTATCATTACAACTTGCATGGATCCCTGGGCAACATCTCTGGAGTTTTTGGACAACATGGCTGCAATTATGAGAAACAGCATACTTTGTGCCATTGGATCGGTCACTGATCCTATTTCATCCCACACGTTTGTGAGTACCGGCGTGGTCAATCAAAGCTGCGAGGTGTTGGCTTGTTATGTGGCCGACTTTAACGAAGCCGGCAAGCAGTACGACACAATTGTAAAACTTCAATTTGAGTCTGATGATGACGTTAATAAGTTCATCTCCAAGCATGCGCAGTTATTGAAGTCGAGCAAACAGCCCGCGCCACCGATTGTCTTAAGAAGCGGCACCAAGAAGAGGTTACACGACGTCTTTTTCGAAAAATCCGAGTATTCTGGCGAGGAAGAGACATTTCATTGCTTTGCAGGTCTTTCTGGTAACGATGATGGAAATCTTCATCCTTTCTTGACAGCAAAAATGAAGATCATTGACGTTCCACGCTACGAGCATTTTGATCAAGATGATTACCCAGAGTGCTTATCCTACTTTATGTGTGGCGACGGAAAGAAAGCCTTTCTATTTCACGTTCCTACAAAAGCCCCTGATTTCTTTCAGGTCGTTCAACTTGACGCAGTTCCTGAAGGTGTCGGCAGTGAAGTGGCTACGGACCTGTTACTCAAGTATGGAGTAGAAATCGAGATTCCAAGCATTCGTGGCGAACCATGCATCATTGACGGGGTAATTCAGGATCCACTTCCAGATGACGCATTTGACATCTCCTTCGTCGGAATCGATGGCCAAGAAGTCATAAGCAGTGTCAAAATTGCTCACAAAATCTGGTTCTCAGGGACGTACTAA

Transcript

Ahemp_022369-T1

Protein

Uniprot

Uniprot term	Description
A0A481NV25	L-tyrosine decarboxylase OS=Enterococcus faecium OX=1352 GN=tdc PE=1 SV=1
P0DTQ4	L-tyrosine decarboxylase OS=Enterococcus faecalis (strain EnGen0310 / MMH594) OX=1158653 GN=tyrDC PE=1 SV=1
Q838D6	L-tyrosine decarboxylase OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=tdc PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00282	Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002129	Family	Pyridoxal phosphate-dependent decarboxylase	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR050477	Family	Group II Amino Acid Decarboxylases	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42735	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016830	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0019752	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan