Detailed information of Ahemp_023858-T1 in Acropora hemprichii

Genomic Location: scaffold_5271:113...7075
NR annotation: XP_029180998.2, transcription elongation factor SPT5-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O00267Transcription elongation factor SPT5 OS=Homo sapiens OX=9606 GN=SUPT5H PE=1 SV=1
Q5R405Transcription elongation factor SPT5 OS=Pongo abelii OX=9601 GN=SUPT5H PE=2 SV=1
Q5ZI08Transcription elongation factor SPT5 OS=Gallus gallus OX=9031 GN=SUPT5H PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00467KOWKOW motifFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039659FamilyTranscription elongation factor SPT5Interproscan
IPR024945DomainSpt5 C-terminal domainInterproscan
IPR041975DomainSpt5, KOW domain repeat 2Interproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR041977DomainSpt5, KOW domain repeat 4Interproscan
IPR041978DomainSpt5, KOW domain repeat 5Interproscan
IPR041976DomainSpt5, KOW domain repeat 3Interproscan
IPR005824DomainKOWInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11125SUPPRESSOR OF TY 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0032044Cellular ComponentDSIF complexInterproscan
GO:0032784Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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