Detailed information of Ahemp_024018-T1 in Acropora hemprichii

Genomic Location: scaffold_5637:155...6797
NR annotation: XP_044163480.1, LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9VCU9Endoribonuclease Dcr-1 OS=Drosophila melanogaster OX=7227 GN=Dcr-1 PE=1 SV=1
A0A8J1LLF7Endoribonuclease Dicer-S OS=Xenopus laevis OX=8355 GN=dicer1.S PE=3 SV=1
Q9UPY3Endoribonuclease Dicer OS=Homo sapiens OX=9606 GN=DICER1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF02170PAZPAZ domainDomainInterproscan
PF20931Dicer_platformDicer, platform domainDomainInterproscan
PF20932Dicer_dsRBDDicer, dsRNA-binding domainDomainInterproscan
PF03368Dicer_dimerDicer dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038248Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR000999DomainRibonuclease III domainInterproscan
IPR003100DomainPAZ domainInterproscan
IPR048512DomainDicer, platform domainInterproscan
IPR044441DomainDicer, double-stranded RNA-binding domainInterproscan
IPR005034DomainDicer dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950DICER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004530Molecular Functiondeoxyribonuclease I activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006309Biological Processapoptotic DNA fragmentationInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan
GO:0016891Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan

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