Gene detail

Detailed information of Ahemp_024304-T1 in Acropora hemprichii

Genomic Location: scaffold_6312:168...6145
NR annotation: XP_044184553.1, E3 ubiquitin-protein ligase rnf213-alpha-like isoform X3 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0A0R4IBK5	E3 ubiquitin-protein ligase rnf213-alpha OS=Danio rerio OX=7955 GN=rnf213a PE=3 SV=1
E9Q555	E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=3
A0A0R4I9Y1	E3 ubiquitin-protein ligase rnf213-beta OS=Danio rerio OX=7955 GN=rnf213b PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07728	AAA_5	AAA domain (dynein-related subfamily)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031248	Family	E3 ubiquitin-protein ligase RNF213	Interproscan
IPR011704	Domain	ATPase, dynein-related, AAA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22605	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07870	RHOT1, ARHT1; mitochondrial Rho GTPase 1	EC:3.6.5.-	GTP-binding proteins	ko04031	deepkoala