Gene detail

Detailed information of Ahemp_026271-T1 in Acropora hemprichii

Genomic Location: scaffold_12565:11...3206
NR annotation: XP_015772508.1, PREDICTED: transport and Golgi organization protein 6 homolog [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8C3S2	Transport and Golgi organization protein 6 homolog OS=Mus musculus OX=10090 GN=Tango6 PE=1 SV=1
Q9C0B7	Transport and Golgi organization protein 6 homolog OS=Homo sapiens OX=9606 GN=TANGO6 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10363	RTP1_C1	Required for nuclear transport of RNA pol II C-terminus 1	Repeat	Interproscan
PF02985	HEAT	HEAT repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR019451	Domain	RNA polymerase II assembly factor Rtp1, C-terminal	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR021133	Repeat	HEAT, type 2	Interproscan
IPR039600	Family	TANGO6/Rtp1	Interproscan
IPR000357	Repeat	HEAT repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20959	TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009306	Biological Process	protein secretion	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan