Gene detail

Detailed information of Ahemp_026606-T1 in Acropora hemprichii

Genomic Location: scaffold_14148:1...2111
NR annotation: XP_015773544.1, PREDICTED: serine/threonine-protein kinase 35-like [Acropora digitifera]
Species abbreviation AHEMP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Ahemp_026606-T1

ATCCTGACCGAATACTGCTCTGGTGGCACCTTAAACGAACGGCTATCTGAACCCAGCAGCGAAGAAACGACTCTGAAGTGGCTGTGTCAAATGGCAAGCGCTTTGAGTTACCTCCACTCTCGACATATTGTCCATCGTGACTTAAAACCCGACAATGTTTTACTGTCAGATTCAGTGAACGAAAACCTGAAACTGGGAGATTTTGGCTTAGCAAGGGAGTTTCTGGCCTTAAAGCAAGACAATTCCCATCAATCCCCAATGGGCTTAGCAGAGTACTACATGCAGTCAGGAACAGGCCCAGCGCACTGGATGGCCCCTGAAGTCTTTCGATGTCATTACACAGAAAAGGCAGATATATTCTCCCTCGGAGTTCTATTCAACGCAATTCTTGTGCGAGACTACGCATTTTCATCGAACCACAAGAGATGGTATGGCGCCTTTGTGAAAGTGTCTGGCGGCGTTAAAGTGGGCCTGGGTTACGCAATGTCAATTCTCGGGGCGTCGGCTATGGAAGAGTTTACGGACGGGTATTCACTGAAGGAGCAAAACGGGTTCCGTGGCTTGGTGTTAGATGCGTTGAGTTATGTTCCTCGCGCTCGACCAGGGGCGGATGAAATTTATTGCAGGGTTGAAAATATATCTGCCCGAATTTATGGACAGCTTCAGGGTACTCGCGGAAAGAAAGTGAAAACTCAGCGGGCAGGGAACAGTTGTTGTATCAGTTAGTGTTTGTAATAATTAACACTTGTGAGAGAGATTCATCTGTCGCTTGCCAGCAGACACTGATCCATGTTTAATGTTTGAAGACGCAATCTTATTTCTTTTGACTCGCCGCCTTTTGAAGGCATTATCCTGTTTTTAGGTCCATTAAGAAGCTTTTAAGAAAGGACGACGTCGACGACAGCGAGCTCGAGGACGTCGTCTGAAAATGTAACTCTGCGTTTCTGCAATCACTTCTCGATTATTTCAAATCTTTTGGCTTAAAAGAATGTGTATAAACTTTGCTGGAATGAAATTGTTTTGAGCGGTTTTTGGAGATAAGAGGGAAACAAACTTATAATTTGTCATAAAGTGCTCTCGTCGTCATCATAACTGCAAAACAGGTCATTTCACGTTGTCGAAAGGGCAAAGATGACTGCGAAATGTATAAGAAGGAAAAGCGCACGCGCAAAGCGTGCAACTAGTGTTTTTCGCCATAATTATCCAAATTTCTTAAGTTCCTATTACCGCCGTCGTCATGGTTTCTTAGCCTTACCGTTTACGTGGCGACGACTATTGGTGTTCGACCAAAATTGCATGTGAATTCTTGAAATTATTGAAATCAAATCGATGATCGTGTACTTGAAAAATTACGTCAGAGATCAGAAGTAGCCGCAGGAAATTCCAGGGAAGAGAGAATGATTAAATTTGGTGTGCTGTTTTCCTTTGAGAAGAATCGTTTTATTTGTCGTCATTTTTCATTATAGAGGGTGTTTCTAGATTCCTTGAGGACCCTCATTTTGTCTATGTGGAGAGAAATTAATTTAGGCTACGAAATGCCATTTTATGTCTTTTCTTCTTGTTAAAGCAATATCCCAAGAGGAAATATTGTCTTCAGTAAGGGCCTTTGCATCGAACTGTTAATGTTTCAAGAATGCACTTCTATTTCACAAAGTTAATGCTTTTCAGTGAATTAGAAAAGATTTTCATTGAGTTTAGAGCTGTAAACATCGACTGAAAATTACTGCAGGCGATTCAAAGAAAGTCAGCACCGGAGAGCACAAAGCGAGGGAAAATCGACCGATTTTGCTCGTACCTCTGATTGGATGAGTGTAAAGCAAAATGATAAAAGTTCTCCTGAGAGGTTGTGGTACAAGACAATTCCTGAAGTTAGCTTTGATTTAGTTGAGAACTTGTCAAGGATTTCATTCCATTGAGGAGAAACCTCACAACATATTTGAGGACTCTATATTGCCTACGAACAGTTAAGTATCAGCTTTTTTAAATGAGGCAGAATATGACTCCAATTTTCCCTCTAGTATACGCTATTAAATAGTACTAGAAATAGTGATCACTAAAGGTGCCCCCGCTTTTCATAATGGTTATGGGATGTGTATTTGATATAAATACTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q940A2	Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At2g40860/At2g40870 PE=2 SV=1
Q9FNE1	Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1
Q9SXB8	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001083 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050167 all species →	Family	Serine/threonine-protein kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257 all species →	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Ahemp_026606-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.