Detailed information of Ahemp_027096-T1 in Acropora hemprichii

Genomic Location: scaffold_16929:6...1977
NR annotation: XP_015767231.1, PREDICTED: cartilage oligomeric matrix protein-like isoform X4 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q06441Thrombospondin-4 OS=Xenopus laevis OX=8355 GN=thbs4 PE=2 SV=1
Q8JGW0Thrombospondin-4-B OS=Danio rerio OX=7955 GN=thbs4b PE=2 SV=1
P35445Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

TOP