Gene detail

Detailed information of Ahemp_028387-T1 in Acropora hemprichii

Genomic Location: scaffold_31678:50...1095
NR annotation: XP_029190484.2, protocadherin-like protein [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B8V7Q1	Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q8TDW7	Protocadherin Fat 3 OS=Homo sapiens OX=9606 GN=FAT3 PE=1 SV=3
Q8BNA6	Protocadherin Fat 3 OS=Mus musculus OX=10090 GN=Fat3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028	Cadherin	Cadherin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050174	Family	Protocadherin/Cadherin-related Cell Adhesion	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR020894	Conserved_site	Cadherin conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24028	CADHERIN-87A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16503	CDHR3, CDH28; cadherin-related family member 3	-	Cell adhesion molecules	ko04515	deepkoala