Detailed information of Ahemp_029484-T1 in Acropora hemprichii

Genomic Location: scaffold_2099:9683...12774
NR annotation: XP_015779083.1, PREDICTED: E3 ubiquitin-protein ligase TRIM71-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E1BD59E3 ubiquitin-protein ligase TRIM56 OS=Bos taurus OX=9913 GN=TRIM56 PE=2 SV=1
Q9BRZ2E3 ubiquitin-protein ligase TRIM56 OS=Homo sapiens OX=9606 GN=TRIM56 PE=1 SV=3
Q5EBN2Putative tripartite motif-containing protein 61 OS=Homo sapiens OX=9606 GN=TRIM61 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047153FamilyTRIM45/56/19Interproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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