Gene detail

Detailed information of Ahemp_029727-T1 in Acropora hemprichii

Genomic Location: scaffold_26224:86...1385
NR annotation: XP_015775447.1, PREDICTED: superkiller viralicidic activity 2-like 2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9CZU3	Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1
P42285	Exosome RNA helicase MTR4 OS=Homo sapiens OX=9606 GN=MTREX PE=1 SV=3
P47047	ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MTR4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21408	MTR4-like_stalk	Exosome RNA helicase MTR4-like, stalk	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050699	Family	RNA/DNA Helicase	Interproscan
IPR048392	Domain	Exosome RNA helicase MTR4-like, stalk	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12131	ATP-DEPENDENT RNA AND DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000460	Biological Process	maturation of 5.8S rRNA	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006401	Biological Process	RNA catabolic process	Interproscan