Detailed information of Ahemp_029919-T1 in Acropora hemprichii

Genomic Location: scaffold_32:283187...296854
NR annotation: XP_015767064.1, PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q9BZA8Protocadherin-11 Y-linked OS=Homo sapiens OX=9606 GN=PCDH11Y PE=1 SV=1
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00017SH2SH2 domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000980DomainSH2 domainInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

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