Genomic Location: 001233F_pilon_pilon:39272...41393
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families
| CDS |
| BRAKERFUXT00000001348 |
| Transcript |
| BRAKERFUXT00000001348 |
| Protein |
| BRAKERFUXP00000001348.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008484 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14931 all species → | IFT20 | Intraflagellar transport complex B, subunit 20 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR028172 all species → | Family | Intraflagellar transport protein 20 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31978 all species → | INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005794 all species → | Cellular Component | Golgi apparatus | Interproscan |
| GO:0005813 all species → | Cellular Component | centrosome | Interproscan |
| GO:0005929 all species → | Cellular Component | cilium | Interproscan |
| GO:0030992 all species → | Cellular Component | intraciliary transport particle B | Interproscan |
| GO:0042073 all species → | Biological Process | intraciliary transport | Interproscan |
| GO:0051642 all species → | Biological Process | centrosome localization | Interproscan |
| GO:0061512 all species → | Biological Process | protein localization to cilium | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K16473 | IFT20; intraflagellar transport protein 20 | - | Cilium and associated proteins | ko03037 | deepkoala |
Transcript abundance of BRAKERFUXP00000001348.1 across 18 RNA-seq samples of Telmatactis stephensoni. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Club-tips | 3 | 0 | 0.00 | 0.00 | |
| Actinopharynx | 3 | 0 | 0.00 | 0.00 | |
| Tentacles | 3 | 0 | 0.00 | 0.00 | |
| Pedal disc | 3 | 0 | 0.00 | 0.00 | |
| Body column | 3 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
