Genomic Location: 001123F_pilon_pilon:42949...57893
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families
| CDS |
| BRAKERFUXT00000001433 |
| Transcript |
| BRAKERFUXT00000001433 |
| Protein |
| BRAKERFUXP00000001433.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03142 all species → | Chitin_synth_2 | Chitin synthase | Family | Interproscan |
| PF00536 all species → | SAM_1 | SAM domain (Sterile alpha motif) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013761 all species → | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
| IPR001660 all species → | Domain | Sterile alpha motif domain | Interproscan |
| IPR029044 all species → | Homologous_superfamily | Nucleotide-diphospho-sugar transferases | Interproscan |
| IPR004835 all species → | Family | Chitin synthase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22914 all species → | CHITIN SYNTHASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0004100 all species → | Molecular Function | chitin synthase activity | Interproscan |
| GO:0006038 all species → | Biological Process | obsolete cell wall chitin biosynthetic process | Interproscan |
| GO:0016758 all species → | Molecular Function | hexosyltransferase activity | Interproscan |
| GO:0030428 all species → | Cellular Component | cell septum | Interproscan |
| GO:0071944 all species → | Cellular Component | cell periphery | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00698 | CHS1; chitin synthase | EC:2.4.1.16 | Glycosyltransferases | ko01003 | deepkoala |
Transcript abundance of BRAKERFUXP00000001433.1 across 18 RNA-seq samples of Telmatactis stephensoni. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Club-tips | 3 | 0 | 0.00 | 0.00 | |
| Actinopharynx | 3 | 0 | 0.00 | 0.00 | |
| Tentacles | 3 | 0 | 0.00 | 0.00 | |
| Pedal disc | 3 | 0 | 0.00 | 0.00 | |
| Body column | 3 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
