Gene detail

Detailed information of BRAKERFUXP00000004237.1 in Telmatactis stephensoni

Genomic Location: 000874F_pilon_pilon:126075...131969
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERFUXT00000004237

ATGGCTAATTTGAATGGTAAATCATTATTAGATTCTTCAGAAACACTTGACCAAGAGAAAGTTGTCGAAGAACTCTCTGGTGTTGATTTGGAAAAAGCAGAAGGATGCGTGAATAAGTCCAAGAGTGATCTGATACAAGCAGTGATCCAAGCTGAAGGTGGTAATCAAGAAAAGCCACCAAACATTAACTTTGGTGATGACCAAGACAATAAAGTTCTTAGCTATGAAGAGTTTAAGGATGGCTTCACAGCAAATGTTGATGAAGAAAGCAAAAAGTCTCTCTCTGAAGAATTCATGAAAAAGATGTACAAGAAATACCTAAAGGACAGTGAAGAGACCAAAAATGAAGTCCGTTATGGAGAGGCAACAACTTCTAAGTACAGCTGGCATGAAACAGATGAAGGAGATGGTTCCATTACTGTTATTGTGTCAGTTCCTTCAGACACTTCAAAGTCTTCTGTTGTAAGTAAAGTCAGTCCTCGGCATTGGACACTGGGTGTAAAAGATAACCAGACAATCATTGATGGAGAATTTTACAGTAGAATTCAACCTGATGAGTGCTTTTGGACATTTGATGGTCCTGGAGTCATCCAAATGACTTTACAGAAAACTAATCCAAGTGAAGGACTTTGGCCAGTCCTCATTAAAGGAGAAACTCATCTCACTGCACAGCAGATACATGATGAAGCAGTAGAAAAAGAATtccagaaaaatgaaaaaattcacaGTATTTTGGAGTCAATGTGGTTATACAACCAAACATATCAAGCTGTATTAGTCAAAGGTGGACCCCAACAACCTCTTTGGTACATCATGGATGAGGTGGGCTCTGCTTTGACACACAGTGCTAGTCCAAACATGAGGTGTGCTCCATTTGCCTATGCTGTGACTGGTGTTTTTTATTCTCTCGTTTGGCCAGTTGCTGACATAGAAAAGGGTGGTGTCTGTACCAGAGACTTTTGTCCTTCTCTTACACCTGGGGAAATTCCTATGCAAAAGGAAGCCCGATTGCTAGCCTGTTTACTGGAAATGCCAGAGGAATATCCAAGATCTTTCTTACAAGACTATTCTAAATCAATCTCAACTGGAAGTCCCTCTAACCTTCAAGTTAAGATAGAACCCCTGGTATCAGAGATGCAGAAAACATCCTCATCTGAGTTGAAACTTCCAGAAAAGTTTTATGTTGGTGAAAAGTATGATAAAATTAAGTCTATTTTAAGCAGTCTTGGTGGCCATTTTGCTACACATCCTGATGATGCTACTGCAGTATGGGTAGACAAGGCCTTGCCGACAGTGAGTGAATCACAAAAAGTCAATTACTTGAGTGGAGAtgactttttaacaagacgagATGTATTGTCAAGAATGTTAACTAAAAAGCTGGGTCAGGTGCCATGGTATCCCACATCCTTCAACCTTCGATCACAGTTGCCTGCTTTTTGTGTAGAGCATTACATGAAGGGATTGTCTGCCATGTGGATTGTAAGATCAGCAAACCCTAATGACTTCCATTTTAAACCAGTAGTCAGCAGTGATTTGCGGAGGATTATTAGACTTGGAGAGACTTGTCCACTTGTGGCATCTGAATTTCACATCACTGGTGCTCTCTCCCATAAGAAACACTTTGTTCTTCAGTACTCTGTGTTAGTCCCTAAACTCAAGCCACTAGAACTCCTCATCCACAACACACCTAACATCAGGAAGACCCCCAAACCATTTAATGCTTTGGCTCCTATTGATGAGTATGACTCCAGCATGCTTTTAACTACCACTGATGACATAACTAAACAAGATGAAGAAACATTCCAAGACTTTGTGAAAAACTTTGAGAAAAATTACACACCAAGATGCAAGCAAACCTGGGTAGAACTTCAGCAAATAATTTACACCCATATTCTAGAGCTGTTTGTGGCAGTTTCATCTAGTTTGTCTGCTCCAAGAAAGACCACAAGTCAAGAACAAACCCAAGGCACATTGTCAGCTGTTTATGGAGTAGATGTCATCATCAAGGAAGACATGTCAGTTCTTATAACTGGTGTTGATGCAGTTCCATCATTTGCTAATGACCAGGTTGCAAAAGAAGTTCTCTTTTTAATGTATGCAGACAAAGATTCTTATAAGAAGGCAGGAAATCATGTAACTATGGTAACATCTGTCTGA

Transcript

BRAKERFUXT00000004237

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04969 all species →	CS	CS domain	Domain	Interproscan
PF03133 all species →	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007052 all species →	Domain	CS domain	Interproscan
IPR004344 all species →	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR027749 all species →	Family	Tubulin--tyrosine ligase-like protein 12	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46088 all species →	TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0036211 all species →	Biological Process	protein modification process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16609	TTLL12; tubulin--tyrosine ligase-like protein 12	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.