Gene detail

Detailed information of BRAKERFUXP00000011891.1 in Telmatactis stephensoni

Genomic Location: 000553F_pilon_pilon:68296...80762
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERFUXT00000011891

ATGTCGGCTCCGAGTGGCGAGAAACAGACCAAAGCAAAGAGTAAAAAGTCCTCAATAAATAAGGGCACTAAACAGGCTAAAGGAAAGGAAGCGGCCATAAGTGACGAGAAATTTCGTGGAGATGGTGTGAGCTTCAAATGCAAGcTTGTTGGTGTAGCAGAAGTTGATGGTCCTAGAGGAGATAGTATGTGTATAGAGGCAATCAAGAAACTGAAGCAACATATAAAACAGACTGGTGAACACAAGCCAAAGATCATTTTGAATGTAACTCTTATGGGGATCAGAATATTAGAAGAAAAAACTAAAAATGTATTGTTTGAGCATCCAGTCAACAAAGTGTCTTTTATAACCCATGATCCTGATGACAAGAAGATTTTTAGCTTCATTAGTAGTGCACGATGTTCATCAGGTCATGTTGGTCACATGATGTATGCTATCAAATATGACAAAGTGGCTGGTATTATTACAACAACTCTGTATGAGCTGTTTCAAACTGTATATAGACTGCGACAAGAAGCAGCTCAGAAGCAAAGACAAGCACAGTCGACACCTCAGACTCCAGATAATATCTCTCAAGGAAGCACAGCTGTAGTGTCAAATGGGCCAAGTCAGGCTAGTAGCATCAATGATACAAACATTTATGAGGAGCCATCATCTACATCAACCTTATCAACTATTGTGTCAGCCAATTCTGACACTTCACACTACCAGAGTCCCACACCAAGACCTTTGCCTCCTGCTCCTTACAAGTCACAAGGAAATCTTGTCAATCAAGAGAGCAAGGAAAACGCTGTGGACACAATACCAGATCAAGCCTCGAATACACCAGCATCTGATCAGTTCTTTAGTTCATCAGTGTTCTCTCAGCCAGACCCGTCAGCCTCTGATAATGTTTCCTTATCATCTGTAGACTTAATGAGAAAGGAgtcaatttcttcttctatttctTCATCTTCCGAGACCGCTTCCTATGATGCAAAAAGTTTGGATTTAAAATCTGGAGTGGCTTCATCTACTCCGCCATCAATTCCTCGCACAAGACCTGTATCAAGTAACTCTTCAGGACAAGCTGTAGATGTAGTCAAACCCAAGGTCCCTGAAGAAGAAGACCCAGACTATGAAACTATCCCTTCCTGTCAGGATTATGAAACTATTCCCACTGATTTAGTCAAGAAAACAGTAGACAAAACTGAAACAAAGCCAGGTTTTGCCGGGTTTAGTTTCAAGGAATCATTTAAAGATGACAACGAATCGCTCCAAGTGTCCAAAAAGGTTGATCCATTTGGTTCTCCAGAAAAGCCTGAACCAAAAAGTGCTAAATCAGAAGAAAGTCCACCATCGTCTGCAGTGTTTAGCAATGATGGCTTCTTCTCTAGTCATTTTGATGACAATTCTGCGCATGCTCCAACAATTGACTTCCCCGCTGATGATCCCTTTGCTCCTACATTGAATAACATTTCTGAAGGATCTAAAGCCAATGTTCCATTTGCATCCAATGATGCTTTTGAATCTGCCTTTGGATCTGGTCAAATGTCTCCTGTAGCCTTTGATCAGGAAAAAGAGAATGGCGCGAAAATTGAAGGAGATATCAGCTGCTCAAATAAAGCAATCGAGAAAGGTGCTCAGAAAGGCGAAGCCTTTTCTTCAAGTAGCGCTTTTGAAGCAGCATTTGGTTCAAGTGAACCATCTTCACCTGCTATCAAACCATCGGAAACAAATGTTGGGGAAAGCCCTGACAGGGAAAAACCCGCAAGTGAAGAACCATTATCTGAGTTGTCTTGGAGCAACGCTTTTGGAGAGGGTAAcagcaagaaaagcaaagaCGAGATGTCTGCGGCTGAACCTTCGTGGAGTGCTGCATTTGAAGACAACGACAGCAAAGATAAGCTCAAGGGAGACGAGTCTACCTTTGCATGGGATGCCTCTTTTGGAACAAAGTTTGACAGCGAGGAGAGTGACCAGGGACAGCAACCTGATAAAGTCGCAACAGAACCTGACTTGTCGTGGACTAACGCCTTCAGTGACAAACCCAAACAAGAGGTGACCTTCTCGTGGGATGATGCATTTGGTGGAGAAACCaaggatggacagacagacaatggTATTGGCGGGAAGTCATTTGATGATGCGTTtggtggacagacagacagtaagGATAGACAGACGGACAATGGTTTTGACGGGAAGTCATTTGATGATGCTTTtggtggacagacagacagtaaggatggacagacagacaatggttttggcgggaagtCATTTGATGATGCTTTtggtggacagacagacagtaagGATGGACAGACGGAcaatggttttggcgggaagtCATTTAATGATGCGTTtggtggacagacagacagtaaggatagacagacagacaatggttttggcgggaagtCATTTGATGATGCGTTtggtggacagacagacagtaagGATAAAGGGATGGAGAATGGTTTTGGTGGGATTTCATTTAATGAGGCTTTTGGTGGTCAGACAGACAATAAgggtggacagacagacaatgcTTTTAGCGTGAGTTCATTCAATGATGCTTTTGCATCGACACCTCTTCGAACCTCTGATACGAAAAAGGACGATATAGTAAAAGGAACTGATCATGTATTCACTGGTAACTTTGGTGCCATTTTGACGCCTATCAAAGCTGATACTTCAGAAAAAGAGACAGAAGACAAGCCAGACGTCAGCCAAGATGGAAAAGGTTCTGCAGAGGATAAAACATCAGAGGGGAAGATTGATTCTAAGAAAGGATTTCCTGAAAGTGATAGGAAGGCTAAATTGGCAGAGGACGAGGATTTGTCTAGTTCTGATAAAGAAAATGACAACGAAAAATCTTCCGAAGGAAAGATAGAAACCAGTCGAAAAATCCCTCAAATTATTGAACCTACTGAAAAAGATGATagtgacgacgatgatgatgatgatgacgccGTTAGACCAGTCACTTTACCAGTCTTACCTACTAAACCAAAAACTGACCTTGAATCACCCTCTGTACCCCCACCCCTACCCCCAAGACCTATGGCACCATTGCCGTCCTTACCACCACGCCCAAGAACCTACTCAAGCCCGGTTACTGGAGAAATCCCTCAAACTCCTCCAAGACCCGCGGGATCTGTAGCATCACCTCCATCGAAGGCTGGGACGCCCAAACGTCTTCCTCCAGCCTTACCTCCAAGAATTGATCTTGAAATGGGGAAAGCTCGAGCAAGCTCAGCTTCGGTTGGCTCTACAAGCACGGCAGTGTCCGATCCGTTCGGTTCGTCCAAATCGACTGAAAATGATATTTCATGGCAGATAAGCTGGtcgaaagaaacaaacaaacaagaggAAAGGGACTCCATGAATTCTAAGAATTCTCCTGATCCCTTCGGTGATGAGTTTTTTACTGACTTTAATTTTAGTGGAGCAAAAATGGCTACTAATGAAACCAACTCGACTACaactcaaaacaaaaacaatttcttCTCCGACCCTTTTGTTTCTAAAGAGGGCGAAGAAGACATGTTTAAAGCAGACTTTGGTGGGGTAGACCCATTTGCTGATTTCTCATCGAATAATACAAACATTGACCCATTTGCACTTGATGGTGGAGACGTCTTTTCAGGGTTCTCCACCAATAAGGATCCATTTGGTGATTCTGAGGATCCTTTTGCCGATAAAGGTACTGTTAACGATCCTTTTACTTTAAGTCCCAAGAAAGATGGTAACGGTGGAACCTTTCAGTTGAGCAAGAATTCAGCCGATGGAGACTTTGCCGACTCCTTTGCATGA

Transcript

BRAKERFUXT00000011891

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00640 all species →	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006020 all species →	Domain	PTB/PI domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47695 all species →	PID DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20043	SNAP91, AP180, CALM; clathrin coat assembly protein AP180	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.