Gene detail

Detailed information of BRAKERFUXP00000016858.1 in Telmatactis stephensoni

Genomic Location: 000413F_pilon_pilon:267168...279646
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERFUXT00000016858

ATGGCGGAATCTATGGGAGATGTCGATTCAAATGACCACGAAAGGGAAGAAACATTGCGCAGACATGCTTTTCTTTCGAACGAATTCAATAGTCCGAACATCAAAGACGCGAAGGACAAGAAGCATGATGTTTACACCACATTGCAAGAAACTCTCGAAGTCCTTCGCGATGAAGCTGGCGGAGTACCTCGAGATTCACATAAGAGGGACGATTTATGGTGCCATCCATTTGAAATACCAGAACATCCCATAGAACAAATAGAGATGAAACGGTCAGAGATCGATTTGGAACGTCAACACTCGAAGATTATGAGAGCGGCCTCCTTGAATGATCTGGACCAGCGTATGTTTTCGTCTAAGGAAGGAAGTTTGGATATTTTGCCTACTTACCAGCGTTTGTCCATCTCTGGAGGAAATACCAGTGGGGTTCCATGGGATGAGCTCAAGCAAGCCTCCAAACTACTTGTTGAAGCTCTGTTCATACGCTTTAAATATATGGTATTGAGTATGCAGAGTTATTGCCCAGTATTAGCAGATGCTTTAAGTGCCGTGCATGAAGACTATAGCATAGACAAATTCCTTGCTGCTCGGAATTTGGACAAGCCATGTCCACCACAACAAAAAGATATGCAGTATTTTGATTATGCCAAGAATTGTCCTTTTGAATGTGAGATTCCCGGTGACTGTGGCTATGAAGTACAAATGGTAGATGGTGTCATACAAGTCATCTCATGTAAACAGGATGGAAATAATAAAGAGTGTAAAATAGTTCATCCTTTTCCTGATTTGCAAGAATTCTTTGATGATCAAAATGTCCTCTTGGCTCTATCCACACATGGACCAATTAAGTCCTTTTCCTATCGTCGCCTAAAATACCTTGAGTCTAAATACAGTCTCCATACACTGCTCAATGAGATGAAGGAACTGGCAGCAATGAAAGAAGTACCTCATCGTGACTTTTACAATGTTAGAAAGGTTGATACTCACGTTCATGCAGCATCTTGCATGAACCAGAAACATTTGTTACgatttatcaaaaagaaaatgaagacaGAGGCAGATACTCCTGTCATTAAGCATGAAGGCAAAGAAGCTACACTGAGAGAGGTCTTTGCCATGCTGAACTTGACACCCTATGATTTAAGTGTTGATACTCTAGATGTTCATGCGGACCGGAATACATTTCATCGTTTCGACAAGTTTAACTCCAAATACAATCCCATTGGTGAAAGCCAACTTCGAgagattttcttgaaaacatCCAATCACACTGATGGAAGATACTTTGCTCAGCTCATGAAGGAAGTATTTAGTGACCTAGAGGAGAGTAAATATCAGAATGCTGAACCTCGTATTTCTATTTATGGCCGTTCCAAAGGTGAATGGGATTCTCTTGCCAAGTGGGCCATTAGTCATTCTGTGTATTCTCCAAATGTTCGCTGGCTTATCCAAGTCCCAAGACTTTATGATGTTTATCGAAGCAAAAAAATGGTGAAGAACTTTGAAGAAGTTTTAGAAAACCTGTTTATGCCACTATTTGAAGCCACTATCAATCCACAAAGTCATCCAGAACTCCACAAGTTCTTGACACAGGTCATAGGATTTGACAGTGTGGATGATGAGAGCAAAGCAGAGAGCCATCTCTTCCAAAAGAACAGTCCACTACCATCACAATGGACAGCAGAGGATAACCCCCCTTACTCATACTATTTATACTACATGTATTCCAATATGGTAGTCCTCAATCACCTTAGAAGGGAGCGTGGATTCAACACTTTTAAACTTCGTCCTCACTGTGGAGAAGCTGGTCCAGCCCACCATCTAGTCACTGCATTCATGTTAGCGGAGAATATCTCTCATGGACTGCTTTTGAGAAAGAGAAATCCTTTACCAGAATTTCTTGCAAGAGGCTTGATTGTGTCCCTCTCTACTGACGACCCTCTTATGTTCCATTTCACAAAGGAGCCTCTTATGGAAGAGTACAGCATTGCAGCTCAAGTATGGAAGTTTAGCCCATGTGACATGGCAGAACTTGCTAGAAACAGTGTGGAAATGAGTGGTTTTGAAGAAGAGTTAAAGCAACAGTGGATTAGAAATTGCAATGCAGAAAATGACATCACTAAAACAAATGTTCCAGATATTAGAGTTTCATTTCGCAAAGAAACTCTCAGGGATGAACTCAACACGATATGTGAAGGGGCAAAAGACTAG

Transcript

BRAKERFUXT00000016858

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00962 all species →	A_deaminase	Adenosine deaminase	Domain	Interproscan
PF19326 all species →	AMP_deaminase	AMP deaminase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006329 all species →	Family	AMP deaminase	Interproscan
IPR006650 all species →	Active_site	Adenosine/AMP deaminase active site	Interproscan
IPR001365 all species →	Domain	Adenosine deaminase domain	Interproscan
IPR032466 all species →	Homologous_superfamily	Metal-dependent hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11359 all species →	AMP DEAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003876 all species →	Molecular Function	AMP deaminase activity	Interproscan
GO:0032264 all species →	Biological Process	IMP salvage	Interproscan
GO:0009168 all species →	Biological Process	purine ribonucleoside monophosphate biosynthetic process	Interproscan
GO:0019239 all species →	Molecular Function	deaminase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006188 all species →	Biological Process	IMP biosynthetic process	Interproscan
GO:0046033 all species →	Biological Process	AMP metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01490	AMPD; AMP deaminase	EC:3.5.4.6	Cytoskeleton in muscle cells	ko04820	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.