Detailed information of BRAKERFUXP00000018992.1 in Telmatactis stephensoni

Genomic Location: 000383F_pilon_pilon:397908...408514
NR annotation: no NCBI-NR hit recorded
Species abbreviation TSTEP · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08149
all species →
BING4CTBING4CT (NUC141) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR040315
all species →
FamilyWD repeat-containing protein WDR46/Utp7Interproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR012952
all species →
DomainBING4, C-terminal domainInterproscan
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14085
all species →
WD-REPEAT PROTEIN BING4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000462
all species →
Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →
Cellular ComponentnucleolusInterproscan
GO:0030686
all species →
Cellular Component90S preribosomeInterproscan
GO:0032040
all species →
Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERFUXP00000018992.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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