Genomic Location: 000306F_pilon_pilon:82507...84859
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families
| CDS |
| BRAKERFUXT00000020719 |
| Transcript |
| BRAKERFUXT00000020719 |
| Protein |
| BRAKERFUXP00000020719.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04949 all species → | Transcrip_act | Transcriptional activator | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007033 all species → | Family | RAB6-interacting golgin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21470 all species → | RAB6-INTERACTING PROTEIN GORAB | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:1905515 all species → | Biological Process | non-motile cilium assembly | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K19748 | GORAB, SCYL1BP1; RAB6-interacting golgin | - | Membrane trafficking | ko04131 | deepkoala |
Transcript abundance of BRAKERFUXP00000020719.1 across 18 RNA-seq samples of Telmatactis stephensoni. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Mesentery | 3 | 3 | 17.00 | 24.09 | |
| Club-tips | 3 | 3 | 11.10 | 17.63 | |
| Actinopharynx | 3 | 3 | 9.43 | 18.06 | |
| Tentacles | 3 | 3 | 12.63 | 16.99 | |
| Pedal disc | 3 | 3 | 10.13 | 14.98 | |
| Body column | 3 | 3 | 8.05 | 14.53 |
Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
