Genomic Location: 000244F_pilon_pilon:83396...95954
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families
| CDS |
| BRAKERFUXT00000026367 |
| Transcript |
| BRAKERFUXT00000026367 |
| Protein |
| BRAKERFUXP00000026367.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006252 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13202 all species → | EF-hand_5 | EF hand | Domain | Interproscan |
| PF13833 all species → | EF-hand_8 | EF-hand domain pair | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002048 all species → | Domain | EF-hand domain | Interproscan |
| IPR011992 all species → | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR018247 all species → | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR039800 all species → | Family | Calcium uptake protein 1/2/3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12294 all species → | EF HAND DOMAIN FAMILY A1,A2-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0006851 all species → | Biological Process | mitochondrial calcium ion transmembrane transport | Interproscan |
| GO:0036444 all species → | Biological Process | calcium import into the mitochondrion | Interproscan |
| GO:0051560 all species → | Biological Process | mitochondrial calcium ion homeostasis | Interproscan |
| GO:1990246 all species → | Cellular Component | uniplex complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K22827 | MICU1; calcium uptake protein 1, mitochondrial | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
Transcript abundance of BRAKERFUXP00000026367.1 across 18 RNA-seq samples of Telmatactis stephensoni. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Club-tips | 3 | 0 | 0.00 | 0.00 | |
| Actinopharynx | 3 | 0 | 0.00 | 0.00 | |
| Tentacles | 3 | 0 | 0.00 | 0.00 | |
| Pedal disc | 3 | 0 | 0.00 | 0.00 | |
| Body column | 3 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
