Gene detail

Detailed information of BRAKERFUXP00000030156.1 in Telmatactis stephensoni

Genomic Location: 000188F_pilon_pilon:565435...567456
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01592 all species →	NifU_N	NifU-like N terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011339 all species →	Family	Iron-sulfur cluster assembly scaffold protein IscU	Interproscan
IPR002871 all species →	Domain	NIF system FeS cluster assembly, NifU, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10093 all species →	IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0006879 all species →	Biological Process	intracellular iron ion homeostasis	Interproscan
GO:0008198 all species →	Molecular Function	ferrous iron binding	Interproscan
GO:0051537 all species →	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22068	ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.