Gene detail

Detailed information of BRAKERFUXP00000038904.1 in Telmatactis stephensoni

Genomic Location: 000094F_pilon_pilon:477425...497353
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERFUXT00000038904

ATGGCTATTTGCTCTCAGAGCCCTCTGGAGCTCATCCAAGGAGTTTTTTGTCCTACAATTGCCGTCACTTGTAGCGAGGATGCTGAACAAGTTTGCATGAAGAATCAGTTGTCGTTTGTGGAAATGACTCGGCCATTTTGTCAGCTTACAACAGAAGCTCACATTAGGGATCCTTCAGGTGCAGTCCACACCGTCAAAAACTGGAAACTACGTTTACTTGAGATGTCAGCACCTCATCCACCTCAACATGTTATCAACAAATTACTGCATGAAGTTGTAGCTAGAACCCAGCCAGTAAATACTGAAGCAAGTAGCTATATTCCTGAATATCAAGCCAAAGCGTCTACACCATGGTTTGAGGCCTATAGAGATTGTTTCTTTCAACTTCTAAAACCCTCTGACCATGAGTTCATCAGGCACTTTCTATCTTGTGTATTTGTTGTGTCATCACACAACTCGGATCCAATGAATGCTTTTGCAACAATGACCTCACAGCATATTGAGCAACAACAAACTTCTCCTAACAGCCATGTCAAGTGGTTCAGTAATGGGGTTTTTAGATATTATGTTTTGCTTCATGATGTTTCTGATGGGGTGGAATCAAAGGCTGAAGCAGTGTATCAGAGTATGAAGTCAGTTTACGGACTTCATGCATGTCATATGTTGATGGTAAACTCTGTCAACCCTACAGCTGCGCTACAAGTACCAAATTTACCTGACCCATGGAGTCAGTTTATTATACCTGCTAGTGATGAAACACTGGACTGGGATGATAGCATTGATGATACCATGGAAGCAACAGAAGAAGACCCAATCAACTGTGCTGTGGATGAGAACTTTGACCCAGATGCAGTAATTGAGGGTAatgaagaagagaagagaagatcAGGGTCAGGATCAATGTTAATAGGCCCCTTGACCTTTGAAGACAGCACAGAATCAGAGCCTCAAGATCCATTATCCTATAATGAACAATTGAGGAAAGGCAGTGCTGAGCTTTCTAATTCTCATGAAAAGAAGCATTTAGCTGGTCAGTATCGGTACTTTTCCAGTAGGAAGTTTACAAGTGCAGTAAGGAGTCAGATGACACAGCGTAGCCATGGCCTGTGCCTGAGTCTGAGTGATCAAGACAGGATTAAAATCTTTATTCATGAGTTGGCATTTAGAGGGCTGTTACCATATGTGGAAAGAATGATGAAAAACCTTTATGATCAGATCATGGCAAGGAAAGGTCTTCACAGATCAATATTCTCAGCAACCAAGAAGTGGTTTAGTGGAGGAAAGCCTGCTGGACTTGCTTCTGGTTTGGTTCCAGGAATAATCTACACCAATGATTCTCCAGAACTCTTCCATAGAAAGCTTGGGGATTTAGCATTTTTAGTTCAGAACTATGAATTAGCATACAGTTGTTACCATACAGCAAAGAGAGACTTTAATAGTGAACATGCATGGTTCTACTTTGCTGGGGCACTGGAAATGGCAGCCATTTCAGCATTCTTAGCAAGCTTGCAAAGACCATATCCTTCTCACTACATGGAAACAGCTATATCGACATACTTGACTGCATGCAGGCAGCACATGTTTGCAGTTAGAGCAACACTCTTGAGCACTGAAGTACTGAAAGCTAAGAACATATCAGTAGATGCTGCTATGCAATTCATGAGAATGACAGGAGAGGAATCTGATTTGCTTTGTGCATTGTTACTGGAGCAGTCAGCACATTGTTTTCTTCATTCTAGTCCAGTGATGGTCAGGAAATATGCATTTAATATGATCCTTGCAGGGCACAGATTTAGTAAGGCTGCACAGCGTAAACACGCCCTAAGGTGCTACCAACAAGCTCTTTGTGTTTATGAAAGCAAATCATGGCATCTTGCTGAAGATCACATTAACTTTACTCTTGGTCGTCAGTCATTTAATCTTCGTCAATTAGATGATGCTCTGAAGTCATTCAGACAATTACTTGTGTATGAAAGTCAgcaaccaccacaacaacaagcAGCATATCTTAGGGAATTCTTATTTGTATTCAAGCAACTTCTAGAAAATAAAGACAGAGACAAAACCAAATCGAAAACAAAGTCTAAGAGCCTACCATACCTCCCTCTACCAGTAGTAGACTCAAACGCTACAAGAACAATCCTCTCCTACAGAAAAGACCTCTTAGAGACTACCACACCCAGCCAAAACTCCCTCACTCCAACAACCGATTCCCAGGACCCTTTTGGTTTGTCATTATTTGGAGAAAGTGAGCCAAAGTCTCCGCATTCGTCAGAAGTTATGCCAATAGGCTTGGCGTCTTTTGATGAGAGGTATGATATGGAGTTAGCACAGCGGTGGAAGAACCTGGAAGAGGACATTTATGAATGTGTTAATATTACACCTGTACCGCCATTCTTTAGAACACATGTACATTGTTTAAGCTCACATACACAGAATAATTTGAAGCCATACTGCGTCATTAATGAAACTGTTGCTGTTGAAGTAGTCTTTTATAATCCTTTAAAAATCCCACTTAACTTGACCAACCTAATGTTGCTATGGCAATTCACTTCCGAAGATCACAGTTCGacaataattaatgagTTTGAAAGTCATGAAGACTTGGTTAAAACAGAGGTCATAAGTAACTTTGAAATACAAGGAGGCATGAAAGGAGCAGCTCGTTTAACGCTGACTCCCTGCTCTATTGGTGAACTACACATCCAAGGCATCAAGTACAGTCTTAGTAGTATAGCTATTGGGGGTCCTGTGGAAGACTTGTTgagtacacaggaagcccatcctTCAGTGTCTGCTGTTAGTATGTTAGGAAAACTCGACCTGAATATCGTGGGTCCAAGACTGAATCATACTAAAGCTGAGAAGACGAGTGTGATACATGGACAAGATAACCGATTATCCTTGATAGTAGTACCAGTTATGCCACTGCTAGAGGTTCGTTTCCATAACTTTCCAACCAGTCTTCTCAGTGGTGAAGTCCGTCGTACAACTGCAGAGTTCACCAACTCAGGCCAATGTACTCTGACTAACCTTTACATGGCTTCTTCCTCTCCTAATTTCTTCACTATTGGAACCCAATGCACCGAGAAAGATACTAAAAGTAGCTATCAGTATACCACTAGCAACCATGCTGCTGTACTAAATGACGTTTCTCCGGTATCGGACATTAAAAGGGTGTTGGCTGTGCCAATACCCGGTGGTAGTTTATCCCCTGGGGCGTCGGTTAAGCTGCCTGTATGGTTACAAGGCTGTCCTGAGGCTGGTAATCACTCCAGGGAGCTGACGTTTTATTATGAATCGGAAACGAAGAATTCCAAAATGGGtCACCGCGCTCTTCAACATGCTTTCCATGTCGACTCTAGTAGTTCTCTGGTAGTGCGGGCCACAGCCAGACGGAGTAAACATAAAAATGTTCTAAAGGATAAGTCAGACGATGAAGAACAGTTAGTGGTGGCTTTAGATATAGAAAACCTTGTGCAGGGTGAAGAAGCCAATAAACTTGGCGAATTGTTTGTTGTTCAGGTGTCATGTGCTAGTAAACGGTGGCGATTACAACCCCTTAGTCATCATAAATCTGATGGTCTTTTATGTGTGAGGCCTGGTGAAACCGTCATGACCCAGTTCAAGGCTACTAAATACACAGATAAAGTAAACGATTCACTTGGTTTTAGTCATGTATCATTTTCGGACAACGTGATTGATTCTTCTGTCAGTCCCGCTGTAGACTTCTTCTTTCGATCTCAAACTTGGAAggaattatgtaaaacaaacttAGATGAAAGTACTGTTGACACGACTAGACTTGATCTAGGTCTTATTGTATTTTGGAAGACATCATTTATAGATGAGCGATTTACAAAGAAGACCGTAATGGGACAGAGCCACGTTGCCGTGAGAAGACTCGCTGAATCCGTATCAGCTACGCAACCAATGACTACCGAGTCTGCTGTCCCTGTCAGTCCTACCACGTCAGTAGACAGTAGAGAATTACTTATTCAGTATTCATTAAACCACACATCATCGATACAACAAGACTTTTCACGTAACAGACTTGCAAGTGTACCTATAGAGCTTATATTACATAACTGCTGTGATCAAGTGGTTGATGTTTTTGTGGAAAGAAAAGCAAGTGAAACAACAAGTTCTGAAGCTTCCCATGAAATGGGAAGCCCAATTTCTACAACACTCGAAGTCGAAACAGACTCGGGATTTCGACAATCTACTCGTTCTTTCATACTTGTTGGACAGACATCGCGAAGACATCGGCTTGAGCCCAACAGTACTTCATCGATACACCTCAAAGCCATGATATCATTACCTGGCGTGTATAATCTAAATCAATTATGTGTATATGCGGTCGTTCAAGGCAGTGACTCTTCTAAACTAGACTTTGATTTAAATGCATTAACGCTACAAAAGCCTTCGCCGCCAAGCTTCATTGAAGTGGAGGACTCCAATTATGTAGATAGTTCTTCAAAAGAACTAATCTTTTTGGGAGATTTAGATAATTCATAG

Transcript

BRAKERFUXT00000038904

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12739 all species →	TRAPPC-Trs85	ER-Golgi trafficking TRAPP I complex 85 kDa subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024420 all species →	Family	TRAPP III complex, Trs85	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12975 all species →	TRANSPORT PROTEIN TRAPP	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:1990072 all species →	Cellular Component	TRAPPIII protein complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20305	TRAPPC8, TRS85; trafficking protein particle complex subunit 8	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.