Gene detail

Detailed information of BRAKERFUXP00000039309.1 in Telmatactis stephensoni

Genomic Location: 000092F_pilon_pilon:828612...832280
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14712 all species →	Snapin_Pallidin	Snapin/Pallidin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028119 all species →	Family	Snapin/Pallidin/Snn1	Interproscan
IPR017242 all species →	Family	BLOC-1 complex, pallidin subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31328 all species →	BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030133 all species →	Cellular Component	transport vesicle	Interproscan
GO:0031083 all species →	Cellular Component	BLOC-1 complex	Interproscan
GO:0046907 all species →	Biological Process	intracellular transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20188	BLOC1S6; biogenesis of lysosome-related organelles complex 1 subunit 6	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.