Genomic Location: 000079F_pilon_pilon:734857...741097
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families
| CDS |
| BRAKERFUXT00000041368 |
| Transcript |
| BRAKERFUXT00000041368 |
| Protein |
| BRAKERFUXP00000041368.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|ZnF|ZnF_UBP · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02148 all species → | zf-UBP | Zn-finger in ubiquitin-hydrolases and other protein | Domain | Interproscan |
| PF03747 all species → | ADP_ribosyl_GH | ADP-ribosylglycohydrolase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR001607 all species → | Domain | Zinc finger, UBP-type | Interproscan |
| IPR005502 all species → | Family | ADP-ribosylation/Crystallin J1 | Interproscan |
| IPR036705 all species → | Homologous_superfamily | ADP-ribosylation/Crystallin J1 superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47665 all species → | HISTONE DEACETYLASE-LIKE PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
BRAKERFUXP00000041368.1.Transcript abundance of BRAKERFUXP00000041368.1 across 18 RNA-seq samples of Telmatactis stephensoni. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Club-tips | 3 | 0 | 0.00 | 0.00 | |
| Actinopharynx | 3 | 0 | 0.00 | 0.00 | |
| Tentacles | 3 | 0 | 0.00 | 0.00 | |
| Pedal disc | 3 | 0 | 0.00 | 0.00 | |
| Body column | 3 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
