Gene detail

Detailed information of BRAKERFUXP00000041788.1 in Telmatactis stephensoni

Genomic Location: 000070F_pilon_pilon:302192...304501
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00252 all species →	Ribosomal_L16	Ribosomal protein L16p/L10e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018255 all species →	Conserved_site	Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaea	Interproscan
IPR036920 all species →	Homologous_superfamily	Large ribosomal subunit protein uL16 superfamily	Interproscan
IPR047873 all species →	Family	Large ribosomal subunit protein uL16	Interproscan
IPR001197 all species →	Family	Large ribosomal subunit protein uL16, eukaryotes/archaea	Interproscan
IPR016180 all species →	Domain	Large ribosomal subunit protein uL16 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11726 all species →	60S RIBOSOMAL PROTEIN L10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0000027 all species →	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02866	RP-L10e, RPL10; large subunit ribosomal protein L10e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.