Gene detail

Detailed information of BRAKERFUXP00000049131.1 in Telmatactis stephensoni

Genomic Location: 000013F_pilon_pilon:800685...812052
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002971 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08174 all species →	Anillin	Cell division protein anillin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012966 all species →	Domain	Anillin homology domain	Interproscan
IPR051364 all species →	Family	Cytokinesis and Rho signaling-related protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21538 all species →	ANILLIN/RHOTEKIN RTKN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000281 all species →	Biological Process	mitotic cytokinesis	Interproscan
GO:0000915 all species →	Biological Process	actomyosin contractile ring assembly	Interproscan
GO:0005826 all species →	Cellular Component	actomyosin contractile ring	Interproscan
GO:0031106 all species →	Biological Process	septin ring organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERFUXP00000049131.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of BRAKERFUXP00000049131.1 across 18 RNA-seq samples of Telmatactis stephensoni. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

18Samples

18TPM > 0

6Conditions

54.3Max TPM

24.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
Mesentery	3	3	40.97	54.35
Club-tips	3	3	28.96	34.64
Actinopharynx	3	3	16.49	20.23
Tentacles	3	3	34.03	41.73
Pedal disc	3	3	10.74	13.25
Body column	3	3	17.79	30.08

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR14511804	Mesentery	Mesentery	not recorded	not recorded	SRP319504	54.35
SRR14511800	Mesentery	Mesentery	not recorded	not recorded	SRP319504	35.96
SRR14511801	Mesentery	Mesentery	not recorded	not recorded	SRP319504	32.59
SRR14511802	Club-tips	Club-tips	not recorded	not recorded	SRP319504	34.64
SRR14511811	Club-tips	Club-tips	not recorded	not recorded	SRP319504	28.92
SRR14511803	Club-tips	Club-tips	not recorded	not recorded	SRP319504	23.33
SRR14511806	Actinopharynx	Actinopharynx	not recorded	not recorded	SRP319504	20.23
SRR14511807	Actinopharynx	Actinopharynx	not recorded	not recorded	SRP319504	16.21
SRR14511805	Actinopharynx	Actinopharynx	not recorded	not recorded	SRP319504	13.02
SRR14511808	Tentacles	Tentacles	not recorded	not recorded	SRP319504	41.73
SRR14511809	Tentacles	Tentacles	not recorded	not recorded	SRP319504	36.04
SRR14511810	Tentacles	Tentacles	not recorded	not recorded	SRP319504	24.32
SRR14511813	Pedal disc	Pedal disc	not recorded	not recorded	SRP319504	13.25
SRR14511814	Pedal disc	Pedal disc	not recorded	not recorded	SRP319504	11.56
SRR14511812	Pedal disc	Pedal disc	not recorded	not recorded	SRP319504	7.43
SRR14511815	Body column	Body column	not recorded	not recorded	SRP319504	30.08
SRR14511817	Body column	Body column	not recorded	not recorded	SRP319504	12.01
SRR14511816	Body column	Body column	not recorded	not recorded	SRP319504	11.26

Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM, StringTie quantification over 18 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.