Genomic Location: 000005F_pilon_pilon:403840...405254
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families
| CDS |
| BRAKERFUXT00000050776 |
| Transcript |
| BRAKERFUXT00000050776 |
| Protein |
| BRAKERFUXP00000050776.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00338 all species → | Ribosomal_S10 | Ribosomal protein S10p/S20e | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036838 all species → | Homologous_superfamily | Small ribosomal subunit protein uS10 domain superfamily | Interproscan |
| IPR027486 all species → | Domain | Small ribosomal subunit protein uS10 domain | Interproscan |
| IPR001848 all species → | Family | Small ribosomal subunit protein uS10 | Interproscan |
| IPR005729 all species → | Family | Small ribosomal subunit protein uS10, eukaryotic/archaeal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11700 all species → | 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003735 all species → | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 all species → | Cellular Component | ribosome | Interproscan |
| GO:0006412 all species → | Biological Process | translation | Interproscan |
| GO:0015935 all species → | Cellular Component | small ribosomal subunit | Interproscan |
| GO:0022627 all species → | Cellular Component | cytosolic small ribosomal subunit | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02969 | RP-S20e, RPS20; small subunit ribosomal protein S20e | - | Ribosome | ko03011 | deepkoala |
Transcript abundance of BRAKERFUXP00000050776.1 across 18 RNA-seq samples of Telmatactis stephensoni. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Club-tips | 3 | 0 | 0.00 | 0.00 | |
| Actinopharynx | 3 | 0 | 0.00 | 0.00 | |
| Tentacles | 3 | 0 | 0.00 | 0.00 | |
| Pedal disc | 3 | 0 | 0.00 | 0.00 | |
| Body column | 3 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
