Genomic Location: 000003F_pilon_pilon:210517...217377
NR annotation: no NCBI-NR hit recorded
Species Telmatactis stephensoni · all data for this species · gene families
| CDS |
| BRAKERFUXT00000051167 |
| Transcript |
| BRAKERFUXT00000051167 |
| Protein |
| BRAKERFUXP00000051167.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00808 all species → | CBFD_NFYB_HMF | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003958 all species → | Domain | Transcription factor CBF/NF-Y/archaeal histone domain | Interproscan |
| IPR009072 all species → | Homologous_superfamily | Histone-fold | Interproscan |
| IPR050568 all species → | Family | Transcription and DNA Replication Regulators | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10252 all species → | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0046982 all species → | Molecular Function | protein heterodimerization activity | Interproscan |
| GO:0001046 all species → | Molecular Function | core promoter sequence-specific DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006366 all species → | Biological Process | transcription by RNA polymerase II | Interproscan |
| GO:0016251 all species → | Molecular Function | RNA polymerase II general transcription initiation factor activity | Interproscan |
| GO:0017054 all species → | Cellular Component | negative cofactor 2 complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K21752 | DRAP1, NC2-alpha; Dr1-associated corepressor | - | Transcription machinery | ko03021 | deepkoala |
Transcript abundance of BRAKERFUXP00000051167.1 across 18 RNA-seq samples of Telmatactis stephensoni. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Club-tips | 3 | 0 | 0.00 | 0.00 | |
| Actinopharynx | 3 | 0 | 0.00 | 0.00 | |
| Tentacles | 3 | 0 | 0.00 | 0.00 | |
| Pedal disc | 3 | 0 | 0.00 | 0.00 | |
| Body column | 3 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (TSTEP_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
