Gene detail

Detailed information of BRAKERHOCP00005001373.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_031552451.1, ubiquitin carboxyl-terminal hydrolase 14-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERHOCT00005001373

ATGACACGTCAAATTGGCGAAACAATTTACAGTCTTaaagttcaaaacaataacgaAGTCTCTGTGAAGTGGGgaaaagaaaaatttgaaaatgttgaagtTGATACATCTGAGCCACCTGAGGTATTCAAAGCCCAGTTGTTTGCATTATCTGGTGTACCACCTGAGAGACAAAAAGTTATGACAAAGGGTGCAGCTTTGAAGGATGATTCGTGGGGAACTTTTAAAGTAAAAAATGGTACAATGCTTCTAATGATGGGAAGTGCTGATCCTTTGCACACTGCACCAGCAACTAAAATAAGATTTATTGAAGATATGTCTGAAGCAGAGGTGGCACATGCTtgTCACATGCCTGCTGGGTTAGCAAATTTGGGAAACACATGTTACATGAATGCAACTGTACAATGTTTGAAGAATGTTGATGAGCTGAAAGATAGCCTAGCAAAGTATCAGGGTCAACTAAGTCTTGGAAATATCATGGCAAGACCTGCAGAGGCGGTCACCATAGccATGAGAGACTTGTACTCATCAATGGATAAAGCCACAGACAGCCTACCACCAATTATATTTCTTCAGGTTCTTCATTCTGTATTCCCTCAATTTGCTGAAAAGACTGAGCAAGGTGTTTACCAGCAACAGGATGCTAATGAATGCTGGAGTCAAGTTGTGCGTATGCTTCAGCAGCGACTACCTGCTGTTGTTTCACCTACACAGGGAGAGGCTGTTGCATCTGCATCATCTACGTCGTCATTTATTGATCAATACTTTGgaatttcaaaaacgtCAAGTCTAAAATGCGATGAAAATGCTGATGAAGAAGCAAGCACATCATCTGAAAAGCTCTATCAGCTTAGTTGTTTCATCTCTCAAGATGTCAAATATCTTCACACTGGGTTACGATCGCGAATGAAGGAATCAATTACAAAGAACTCCCCTACGCTAAATCGAGATGCTAGCTACACAAAGACATCTAGTGTGGATAGACTACCTGCTTATCTTACTATTCAATTTGTGAGATTcttttacaaagaaaaagaGAGAGTCAATGCTAAAATTCTCAAGGACATAAAATTTCCCATGGAGTTGGATGTGTATGATATTTGCTCAGAAGGTCTTCAAACGAAATTAACTCCAATGCGCGACCAATTCAAATCAGAAGATGAGAAAAAGGTTCTTCAAGCTCAGGCAATTAAAGCAGAAGCTAACAATGGCAATGGATCTGAAGTAATGGAAGTTGATAATAAACCTGCATCGAAGAAAACTCTGCCATACAGCTTTGAAAATGATGTTGGATCAAACAATAGTGGATATTATGAATTATCTGCTGTGTTAACTCATCGTGGCCGATCTTCATCATCTGGTCATTATGTAGCATGGGTACGACAAAAAGGAGATGATTGGATTATGTGTGACGATGAGCATATGACACCTGTAAAAACTGAAGATGTATTAAAACTATCCGGCGGTGGTGACTGGCACTGTGCCTATGTTCTATTATATTCATCGAAAAAGCTAGAAATGTCTGataattcaacaatttcaaagaGAGCACGAAAAGCAGTCAACCATCCGAATATTCTACTAAATGCATTTATGATGCAACAGAAAAATGCCTTTAACAAAGATACAAATTTAGATGGTATTATAAACTTAGGCACaagtgaaaataaaatatcctttgatttagttcatgaaaaattaaaaacattttctggtCTAACAATGCCTGAAAAACAAACACATTATTCTACATTTCAtggtgttcatgaatttcGTGAACAAGTAGCTGATTTTTTAACATATTATATGAAACCATTAAAGCAGTTTAATACCGATGATGTTTACTCAATGAATGGATGTGGCTCAATTGTGGATATACTTGCTTATTCAATTTGTGATGAAGGAGAAGGTATTCTGATACCAGCGCCTTTCTATGGTGGTTTTAACATCGATATATCGTTACGTTCGAACGCTATTTGTTATCCCATTCATCTAAGTAGTGCACCACGATCTGATTTTAATGAAGTAAGACCATTTCAACTATCGATTCAAAGAATGGAAAATGCTTTAGAACAAGCTAAAAATGACGGAGTTGCTATTAAAGgattattaattacaaatcCCAATAACCCACTCGGTTATGTTTACAGTGAGGATGAAATGAGAAGCTATATGGAATTCGCAAGTAaacataatttacattttatctCTGATGAAATTTATATGCTATCaatttttgagaaaaataCCAAAATGATTAGTGCTTCAGCCATAGAGACATCTCTACCAAAGGACAAATTGCATATGATATGGGGTTTTTCAAAAGATTTTGGTTTATCAGGATTTCGATGTGGAATATTACATACACTTAATACTGGTGTAAGTGCCTGCTTCAAACAAATGGCTTATTTCAAAAGTGTTAATGCTACAACTCAAAACATGCTTGGTGCCCTCATTACTGATTTTAATTGGATCGATACTATATATTTACCAACAATACATCAACGACTTGGAAACGCCTATGATATAGTGTCAGCTGGTTTAAAGGAACTCAATTTAACATTTGTACCTTCCCAAGCAGGATTTTTTGTTTGGGTAAATTTCCGTGATTTTATCCATCCATTAACtgctgaaaatgaaatgacaTTTTTCATGTCTTTACTAAATCATGGGGTTTATCTAGCACCAAGTCGTGCTTTCTTTGGTAATGAAATTGGTTGGATGAGAATTATATTTTCTGTTCCAATTATTCAATGTGAAATCGCAATGAAAAGATTGAAATCATTTCTAAGTAACAACAATAAAGTATGA

Transcript

BRAKERHOCT00005001373

Protein

Uniprot

Gene family

Uniprot term	Description
Q9JMA1	Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=3
Q0IIF7	Ubiquitin carboxyl-terminal hydrolase 14 OS=Bos taurus OX=9913 GN=USP14 PE=2 SV=3
P60051	Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan troglodytes OX=9598 GN=USP14 PE=3 SV=2

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR044635	Family	Ubiquitin carboxyl-terminal hydrolase 14-like	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43982	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061136	Biological Process	regulation of proteasomal protein catabolic process	Interproscan
GO:0070628	Molecular Function	proteasome binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan