Gene detail

Detailed information of BRAKERHOCP00005002880.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_031565856.1, proteasome activator complex subunit 4-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERHOCT00005002880

ATGGATTGTGAAAAATCTTGCGAGATGCAAGATTGCAATAATACTGAACAAAATGATAGGAAATATCAGAAAATACTGGCTTTCAACAAGCATCTTCCATATTATGCCCGCTTGGACGAGGAGTCTGCTAAAATGCTAAGTGAAATCAAATATAATCTTGGAAGAGCTGTTTTATTGAAGGAGCTAACACCTGGTGCTCTAGTGTGGAGTGGGCGGCTATCCACATATATGCATCTTTATGGCCGGAGATTTTCTCTAGAAGACCATATACATTTCATTAAACTGTTTTATGGATTAATCACATTGCCAGGTTTAGAGCCACAATTTGTCAAAGGCTTTTCTGTTGGATATCATGAATTAATGAAgAAGCATGAACTTATTTCTAACAAGAACCTACAACTGCCGTGGCGGCCactttataatttaattgaatctatcaaattctcaaaatatcaaaacatggGATTAGAAAAGTTCCCACATAAATATCTGGAATCAGTAATACCTCTTGTAAAAATGACTGTGGACTATTTTCCAGTAGAGGCAACACAAGAAATGTTAACTGAATGGCGTCCGTTTTTATGTCCTTTTGATACAATGACAAGTAAAGGAACATTTTATATGTCTCTCTTTTTGCCTTGTGTTCAAATGCATGAAAATCATGCCCAAGGTTCAGATTTATGGTTTGATGATCTGTTTAGCTATTGGCTAAATTATTCATCTCATGTCCATGAAAGTCACGAGGATTTAACAAAACTTTTCAGTCGATTGTCACATAGTTCGCCTGGCTTCATTGATTGGAACCCTCACATTCCCAAGATCTTCAATCGATTTCTTAGTGGGTTGCATTTACCAATGGGTAGTGGTAAACCTGATTACGGTGGAAAGTTTGAATTCTTTTCTGTTTCAATAATGTCCAAATGGATGGTGTATATGATTGGCGGAAATAGTATTGTTCTTGATAATATGGAACAACTTTTTACAGCgttatattcatattattatcCATCAAATTATGGCAGACACACTTCCCGTTTGCTACGGTTCTTAAACAGCTTATCTAGTAATTTTGTTATGAGATTAAGAATGGAAAAGTACAAGCCTGAAACATGGAAGAAAAGACCTCCAATCGAGTCAAGAGTGACTGATGAAGAAATTGAACGTTTTGTGATGATTATGAAACCAGCTGTGTTACTTGGTGTTTTCAGCAAAACAGCCGACTATGAAGCTACTAGTGCTCTGCAAAATCTTGCTGTTATCCGACCAGATTTAATTCTGCCTGATTTAATTGAAAGGACTTTTGAGGCTCTAGATACATTAGTTGAACCACATCAACTGATTGCTACTATGGGCTGCATAGCATCTGTTTCAAGAGTTCTTGTATCAGGTGCTGAAAATTTTCCTGAAGGTCCAACGTTTATATTGCCATTGCTACAGTTGATTTTACCTGGAATCGATCCCAATGATGTCAGAAAATCAATGGGTGCATTCACTGTGATCTCCAGCATTTGCAGTCTGATACCATTTGTTGATTGTTCTTCTTTATTACAAGAAGATGCTTCATTGACAGAGGTTGAAAAACAATTGTGTCACCAATCATCATTATTTGAAGATTTCGTTTTACAATTTTTAGACAGATGCTTTAGCATGATTGACAACAGCTCAGTCGAACAAACAACGCAGCAGGATAATCTGATGATTGATGCCATGAGTACACAAGAAGGATTAATTGGCTTAGGGATGGCATCCACTTTAAGTACCATATTAATGCAATCATCACCACAAATATTCAAGTCTGCTTTGTCGTCATTGTTTAATTTCTGTGCATCACGCGTTCTTGAAGTAACCGTTGCTGGTAAAATGGCCTCACAGATGTTCAGAGCTGCAGCCAAAgCATATCCTGATTTAACGTTCAAGAAGTTTTTGCCTCATTGTTGCTCTTCGATCAAAAATATAGCATCAGGTAAATACATTCATGTGAAAATGTGA

Transcript

BRAKERHOCT00005002880

Protein

Uniprot

Uniprot term	Description
Q14997	Proteasome activator complex subunit 4 OS=Homo sapiens OX=9606 GN=PSME4 PE=1 SV=2
F1MKX4	Proteasome activator complex subunit 4 OS=Bos taurus OX=9913 GN=PSME4 PE=1 SV=1
Q5SSW2	Proteasome activator complex subunit 4 OS=Mus musculus OX=10090 GN=Psme4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16507	BLM10_mid	Proteasome-substrate-size regulator, mid region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035309	Family	Proteasome activator complex subunit 4	Interproscan
IPR032430	Domain	Proteasome activator Blm10, mid region	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32170	PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0010499	Biological Process	proteasomal ubiquitin-independent protein catabolic process	Interproscan
GO:0016504	Molecular Function	peptidase activator activity	Interproscan
GO:0070577	Molecular Function	lysine-acetylated histone binding	Interproscan
GO:0070628	Molecular Function	proteasome binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00649	GNPAT; glyceronephosphate O-acyltransferase	EC:2.3.1.42	Peroxisome	ko04146	deepkoala