Gene detail

Detailed information of BRAKERHOCP00005003196.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: XP_020896071.1, intraflagellar transport protein 52 homolog [Exaiptasia diaphana]
Species abbreviation HOCTO · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y366	Intraflagellar transport protein 52 homolog OS=Homo sapiens OX=9606 GN=IFT52 PE=1 SV=3
Q62559	Intraflagellar transport protein 52 homolog OS=Mus musculus OX=10090 GN=Ift52 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004959 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21178 all species →	Itf52_C	Intraflagellar transport protein 52, C-terminal domain	Domain	Interproscan
PF09822 all species →	ABC_transp_aux	ABC-type uncharacterized transport system	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048643 all species →	Domain	Intraflagellar transport protein 52, C-terminal domain	Interproscan
IPR019196 all species →	Domain	ABC-type uncharacterised transport system	Interproscan
IPR039975 all species →	Family	Intraflagellar transport protein 52 homolog	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12969 all species →	NGD5/OSM-6/IFT52	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0030992 all species →	Cellular Component	intraciliary transport particle B	Interproscan
GO:0042073 all species →	Biological Process	intraciliary transport	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19681	IFT52; intraflagellar transport protein 52	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.