Detailed information of BRAKERHOCP00005008133.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_002737451.2, PREDICTED: LOW QUALITY PROTEIN: HEAT repeat-containing protein 1 [Saccoglossus kowalevskii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H583HEAT repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=HEATR1 PE=1 SV=3
Q7SY48HEAT repeat-containing protein 1 OS=Danio rerio OX=7955 GN=heatr1 PE=2 SV=1
Q9GM44HEAT repeat-containing protein 1 (Fragment) OS=Macaca fascicularis OX=9541 GN=HEATR1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12397U3snoRNP10U3 small nucleolar RNA-associated protein 10 FamilyInterproscan
PF08146BP28CTBP28CT (NUC211) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040191FamilyU3 small nucleolar RNA-associated protein 10Interproscan
IPR022125DomainU3 small nucleolar RNA-associated protein 10, N-terminalInterproscan
IPR012954DomainBP28, C-terminal domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR021133RepeatHEAT, type 2Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13457BAP28Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034455Cellular Componentt-UTP complexInterproscan
GO:0045943Biological Processpositive regulation of transcription by RNA polymerase IInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14550UTP10, HEATR1; U3 small nucleolar RNA-associated protein 10-Ribosome biogenesisko03009deepkoala

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