Gene detail

Detailed information of BRAKERHOCP00005011021.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: VDI02028.1, DNA ligase 1 [Mytilus galloprovincialis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P51892	DNA ligase 1 OS=Xenopus laevis OX=8355 GN=lig1 PE=2 SV=1
Q9W1H4	DNA ligase 1 OS=Drosophila melanogaster OX=7227 GN=DNAlig1 PE=1 SV=2
P37913	DNA ligase 1 OS=Mus musculus OX=10090 GN=Lig1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04679	DNA_ligase_A_C	ATP dependent DNA ligase C terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR050191	Family	ATP-dependent DNA ligase	Interproscan
IPR012309	Domain	DNA ligase, ATP-dependent, C-terminal	Interproscan
IPR012310	Domain	DNA ligase, ATP-dependent, central	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45674	DNA LIGASE 1/3 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003910	Molecular Function	DNA ligase (ATP) activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006266	Biological Process	DNA ligation	Interproscan
GO:0006273	Biological Process	lagging strand elongation	Interproscan
GO:1903461	Biological Process	Okazaki fragment processing involved in mitotic DNA replication	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19761	GGACT; gamma-glutamylaminecyclotransferase	EC:2.3.2.-	Enzymes with EC numbers	-	deepkoala