Detailed information of BRAKERHOCP00005012227.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_027038958.1, protein HIRA-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q61666Protein HIRA OS=Mus musculus OX=10090 GN=Hira PE=1 SV=3
P79987Protein HIRA OS=Gallus gallus OX=9031 GN=HIRA PE=1 SV=2
P54198Protein HIRA OS=Homo sapiens OX=9606 GN=HIRA PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF07569HiraTUP1-like enhancer of splitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR011494DomainProtein HIRA-like, C-terminalInterproscan
IPR031120FamilyWD repeat HIR1-likeInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13831MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000417Cellular ComponentHIR complexInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0006336Biological Processchromatin organizationInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11293HIRA, HIR1; protein HIRA/HIR1-Chromosome and associated proteinsko03036deepkoala

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