Detailed information of BRAKERHOCP00005014079.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: CAB3979262.1, Transposable element P transposase [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3ZTQ1Splicing factor, suppressor of white-apricot homolog OS=Rattus norvegicus OX=10116 GN=Sfswap PE=1 SV=1
Q3USH5Splicing factor, suppressor of white-apricot homolog OS=Mus musculus OX=10090 GN=Sfswap PE=1 SV=2
Q12872Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens OX=9606 GN=SFSWAP PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF09750DRY_EERYAlternative splicing regulator DomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040397FamilySuppressor of white apricotInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR019147DomainSuppressor of white apricot, N-terminal domainInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13161SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000395Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

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