Gene detail

Detailed information of BRAKERHOCP00005015014.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_048577549.1, presequence protease, mitochondrial isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERHOCT00005015014

atgtctgTGTTTATCAGAAATGCATTATGTGGTCGAAGTCCTTTCTTTTTATGCAGATTGCAACCATTGAAGACATCTTTACTGGGGGATGTGAAGCCGTCATTATGTTGTTTATCTAAAAAGCAATATTCTCTTGACCATCACAaTCATATCAAAGAAGGTGATGTCCTCTCTGGCTACACTGTTACCAAGGTGACGCCATTGCCTGATTTCACTGCTCTTGGTATTTCTTTGATTCATAATAAAACAGAGGCAGAGCATTTTCATCTGGCACGTGATgatcaaaacaatgttttcagTGTTGGTTTTCGTACAACTCCTCTGGACAGTACTGGCGTTCCTCACATTCTTGAGCATACAACACTTTGTGGTTCAAAGCGCTACCCTTGTCGAGatccatttttcaaaatgttgaatCGTTCATTGTCTACTTTTATGAATGCTTTTACAGCTAGCGACTTCACAATGTATCCATTCTCCACACAAAATGCCAAGGATTATGATAACTTATTGTCTGTTTATCTTGATGCCTGCTTTTTTCCTAATTTGCGTCAAATGGATTTTTGGCAAGAGGGATGGCGTCTTGAACATGAGATTGTTGATGACAAATCATCTCCAATCATATTTaaaggcattgttttcaatgaaatGAAAGGGGCGTTGTCTAGTGGTGAATCAATCTTTGTCactaaaaatcaaaatcttcTTCTACCAAGTCATACCTATGGAAACGTCAGTGGCGGTGATCCCTTAGTCATCCCACAGTTAACATGGCAACAGCTTGTAGATTTTCATCAAAGTCATTACCATCCGACTAATGCTAAGTTCTTCACTTACGGCGATCTTCCCCTTGAATCTCATTTGAAGCTCATTGATGACGTTgttttgcgtcattttgaaaaaggcaCATTGAGTACTGAAATACCAAATGAACAGACATGGAGCATACCTAGATCTGCATCAATCACATGTCCTATCGACGAAATGGCAGCAGATCAAGATAAACAAACCACTGTTGCTGTTAGTTACGTACTTGGAGATGTAAGAGACCCATTTGAAGCTTTTAcacttgaaatattatcaagtCTTCTTGTGTCAGGTCCAAATTCACCATTCTATAAATCATTAATTGACTCAAACATTGGATCTGGATATTCTCCCGTTATTGGGCTGGATCGTTATACCAAGGATGCATCGTTTTCTGTTGGTCTTCAAGGTGTCAATAAAGATGATGTAGAAATTGTCCTCTCAAAAATTGAAGAAACATTTAAAGAAGCAGTCAAaaatggttttgaaaaagaaagaGTCGATTCTATTCTACATACGGTTGAGCTTGCGCAAAAACACCAAACAAGTAATTTTGGTTTAGGATTTATATCGGGTGCTATGTCTGGCTGGAATCATGGCGATGACCCATCAGAAATGttgcaaatcaacaaattagTCATTCAATTCAAcGACTCGATAGCAACAAATGAACGATTCCTCCAAGAGAAagttgaacaatattttcttggtaacaaacataaattaacatTGACGATGAATCCAGATGTTGATtatcaaaaagaaaaagaagaaagaGAAGTAGAATTACTTAAAGAGAAATTAAGCAAACTAAATGATTCAGATCAAAAGGAGATATTTGACAATGGTTTAAAATTAGCTGAAATGCAAAATGAGCCACAAGATGCATCTTGCTTGCCTCAAATGCACGTCAAAgatGTCGATGCAAAGATCAAACGCACAGAAACTTCTTCCATTTTACTAAGTCGTGGTGTTCCATTGCAACTAAGCGAGCAACCAACCAATGGCATAAGCTATTTCAGAACTGTTTGTAGAACAAGCTCGTTATCTTATGTAACACAGCCATATCTACCATTCTTCTGTCATGTCCTAACAAAaATGGGGGCAGGGGGTATGTCTTACCAACAACTTTCGCAACAATCTCAATTGTACACAGGTGGATTATCTGCAGGTGTTCACTTAAGTCCTCATTTTGAGAAAGAAGATTCGTTTGAATTGGGTGTTGGGTTCTCATCTTATTGccttgacaaaaacattcctCACATGTTTTATCTATGGGAAGAAATATTCAACGGACCGCTGTTTAATAACAAAGACCGACTAAAAACATTACTGACAGCTTACAGTGCTGATCTGGCATCATCAATTGCTGGTTCAGGGCATGCGTATGCCATGACGACTGCATCAAGCTCAATCACAGCACAGGGTAGTATTGGAGAATTGATGAGTGGAATAACACAGGTACGGTTCATGAAAGCATTAGTTGAAAATGATGCCATTGACGAAACAATACAAAAGTTGTATGAAATAGCTGCACATGTGCTATCATCAACTGAAATGAGATGTTCATTAAATACTTTACCTGGAACCATGGAACCAGGAAGTGAAGCATTAGAACAGTTTTTGACAATGATACCTTCGACAAGCGCTGACGACAAAGACCTTGTTGAGAGGCCTTTGTTCAATCCAAAACCAAAAAAGACACACATTCAATTACCTCTGCCTGTCAATTATGTTGGTCGAAGTGCAAGGGCTGTCAGTTACAATCACGAGGACCATGCCAGattGCAAATTTTAGCAAAAGTCATGTCATCAAAATTCTTACATACAGAAATAAGAGAGAAAGGCGGAGCATATGGaggtggtgcatcagttggtagTGGCACTGTACAGTTCTACTCATACAGGGATCCAAATTCAATGAAAACTTTAGAAGCATTCGATGGTGCTATAACCTGGGCAGCCAATGGAAAGTTTGCAGATCAAGATATTGAAGAAGCCAAATTATCAGTGTTTGCATCAGTGGATAGTCCTGTTCCACCAGGACGCAGAGGAAGCAGCCTTTTCTATCATGGCATAACAGATGACATGAGACAATTGTATAGAAACCGTCTCTTTGCTGTGTCAAGACAAGATCTAGTTGATATGGCAACAAAGTACCTTTTGAGTGACGATAACATCAATTCATTCTCGATAATTGGTCCTGACAATGACGACACTACTTCCAATGACGATTGGGTaaaacaaaaagaaacaatCAACTAG

Transcript

BRAKERHOCT00005015014

Protein

Uniprot

Uniprot term	Description
Q5JRX3	Presequence protease, mitochondrial OS=Homo sapiens OX=9606 GN=PITRM1 PE=1 SV=3
Q5RDG3	Presequence protease, mitochondrial OS=Pongo abelii OX=9601 GN=PITRM1 PE=2 SV=1
Q28BR5	Presequence protease, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pitrm1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05193	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan
PF00675	Peptidase_M16	Insulinase (Peptidase family M16)	Family	Interproscan
PF08367	M16C_assoc	Peptidase M16C associated	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011249	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR007863	Domain	Peptidase M16, C-terminal	Interproscan
IPR011765	Domain	Peptidase M16, N-terminal	Interproscan
IPR013578	Domain	Peptidase M16C associated	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43016	PRESEQUENCE PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0016485	Biological Process	protein processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06972	PITRM1, PreP, CYM1; presequence protease	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala